Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2518 |
Symbol | relA |
ID | 6988507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2697759 |
End bp | 2699996 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643380782 |
Product | GTP pyrophosphokinase |
Protein accession | YP_002263866 |
Protein GI | 209695936 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.326663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGCAG TTCGCGGAGC ACATCTTAAG GAAAATGAAA CGTTTGAGTT AGCTGAATGG ATAATCAGCC TTGAACAAGA TAAGAGCACC TCTAAAAAAC TGACAGAGGT GTATCAACAA TGCCAAGAGT TAGTGGATTC CCATGAAAAT GGTCCACTCT TGTTGTGGCG TGGTCGAGAG ATGATAGAAA TCTTGATCAC CCTAAGCATG GATAAGCCGA CTTTAATTGC AGCTCAGTTA TTTCCTTTAG TTTCATCTGG TGTGTTAGAC AGAGAAACGT TAACTGAAAA CTACAATAAA GAAATAGAAA AACTGATTGA TGGCGTTGAA GAGATGGACG CGATTGGTCA GTTGAATGCG TCTGTTGGGG AAGAGTCAGC CTCTTCCCAA GTCGATAATA TTCGTCGAAT GTTATTGGCT ATGGTTGATG ATTTTCGTTG TGTGATCATT AAATTAGCTG AGCGTATTTG TAATTTACGT GAAGTGAAAA ATGAACCTGA AGACGTTCGC CGAGCAGCGG CTAAAGAATG TAATAATCTT TATGCTCCTT TAGCGAACCG TTTAGGTATT GGTCAGTTGA AATGGGAAAT TGAAGATTAC TCTTTCCGTT ATCAGCATCC TGATACCTAT AAGAAAATAG CAAAACAATT GTCTGAGCGA CGTATTGTTC GTGAACAATA TATCCATGAT TTTGTCACGG GGTTAAGTGA TGAAATGGCG GGTTATAACA TCAATGCCGA AGTCAGTGGG CGTCCAAAGC ACATCTACAG TATCTGGCGT AAAATGCAGA AGAAGAGCTT GGAATTTGAT GAATTGTTTG ATGTTCGAGC GGTTCGAATT ATTGCGGATA AACTGCAAGA TTGTTATGCC GCATTAGGGG TTGTACACAC GAAGTTTAAG CACTTACCAA GTGAATTTGA CGACTACGTT GCAAACCCAA AACCGAATGG CTATCAATCT ATTCATACGG TTGTTTTAGG CCCTGAAGGG AAAACCATTG AAATCCAGAT CCGAACAAAG GATATGCACG AAGACTCAGA ACTAGGGGTT GCTGCGCACT GGAAATACAA AGAAGGCTCA TCAAACAGCA GTCGTACTGG TTATGATGAG AAGATTACGT GGCTACGTAA ACTGCTTGAT TGGCAAGAAG AGATGTCAGA TTCTGGTGAA ATGCTGGATG AATTACGAAG TCAAGTGTTT GATGATCGTG TTTATGCCTT TACCCCTCGT GGTGATGTTG TTGATCTACC AATGGGCGCG ACACCTTTAG ATTTTGCGTA TCATATTCAC TCAGAAGTAG GGCACCGATG TATTGGTGCG AAAGTGGGTG GACGAATCGT GCCATTTACC CATAACCTTG CAATGGGTGA CCAAGTTGAA ATTATTACCC AAAAAGAACC GAACCCTTCT CGAGATTGGT TAAACCCAAC CTTGGGTTTT GTGAACTCTG GCCGTGCTCG TGCAAAGATC AATGCCTGGT TTAGAAAACA GAGTCGTGAA AAAAACCTTG ATGCAGGTAA AGAGATTTTA GAAGTTGAAT TAGCAAAAAT TGGCGCAACG TTAAAAGATG CAGAGCAATA CGCACTTAAG CGCTTTAATG TGAATTCAAC GGATGAGTTG TTTGCTGGTG TTGGTAGTGG CGACTTACGT ATTAACCAAG TGATTAATCA CATTAATGCG TTAGTGAATA AACCAACCGC TGAGCAAGAA GATCAAAAAG CGTTAGAGCA ATTGCAAGAA TCTGAAGCGA AGGCACAAGC ACAAGCTCAG GCGCAGAATA AAAAACGCAA TGATGCAGTG GTGGTTGAAG GTGTCGATAA TTTAATGACG CACCTAGCAC GCTGTTGTCA GCCGATCCCT GGTGATCCTA TCGCGGGGTA CATAACTCAA GGTCGTGGTA TTTCAGTTCA CCGCAGTGAT TGTGATCAGC TTGATGAATT ACGTCATCAT GCTGCAGAAC GAATTATCGA CACGGTGTGG GGGAGTGGTT TTGTTGGCTC TTATATATTG ACGTTAAGAG TCACAGCCAT GGATCGTTCT GGTTTATTGA AGGATCTTAC CAGTCTGTTT GCGAATGAAA AAGTAAAAGT GTCTGGCATG AAGAGCCGTA ATGATTACAA AAAGCAGCTG ACTATTATGG ATTTTGATCT TGAAGTGTTC AGTGCTGACA TCCTTAGTCG ATTAATTACT CGTGTTGAAC AAGTAAAAGA TGTCATGGAA GCCTCTCGAT TATCATAG
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Protein sequence | MVAVRGAHLK ENETFELAEW IISLEQDKST SKKLTEVYQQ CQELVDSHEN GPLLLWRGRE MIEILITLSM DKPTLIAAQL FPLVSSGVLD RETLTENYNK EIEKLIDGVE EMDAIGQLNA SVGEESASSQ VDNIRRMLLA MVDDFRCVII KLAERICNLR EVKNEPEDVR RAAAKECNNL YAPLANRLGI GQLKWEIEDY SFRYQHPDTY KKIAKQLSER RIVREQYIHD FVTGLSDEMA GYNINAEVSG RPKHIYSIWR KMQKKSLEFD ELFDVRAVRI IADKLQDCYA ALGVVHTKFK HLPSEFDDYV ANPKPNGYQS IHTVVLGPEG KTIEIQIRTK DMHEDSELGV AAHWKYKEGS SNSSRTGYDE KITWLRKLLD WQEEMSDSGE MLDELRSQVF DDRVYAFTPR GDVVDLPMGA TPLDFAYHIH SEVGHRCIGA KVGGRIVPFT HNLAMGDQVE IITQKEPNPS RDWLNPTLGF VNSGRARAKI NAWFRKQSRE KNLDAGKEIL EVELAKIGAT LKDAEQYALK RFNVNSTDEL FAGVGSGDLR INQVINHINA LVNKPTAEQE DQKALEQLQE SEAKAQAQAQ AQNKKRNDAV VVEGVDNLMT HLARCCQPIP GDPIAGYITQ GRGISVHRSD CDQLDELRHH AAERIIDTVW GSGFVGSYIL TLRVTAMDRS GLLKDLTSLF ANEKVKVSGM KSRNDYKKQL TIMDFDLEVF SADILSRLIT RVEQVKDVME ASRLS
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