| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2518 |
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| Symbol | relA |
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| ID | 6988507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2697759 |
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| End bp | 2699996 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380782 |
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| Product | GTP pyrophosphokinase |
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| Protein accession | YP_002263866 |
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| Protein GI | 209695936 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.326663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGCAG TTCGCGGAGC ACATCTTAAG GAAAATGAAA CGTTTGAGTT AGCTGAATGG
ATAATCAGCC TTGAACAAGA TAAGAGCACC TCTAAAAAAC TGACAGAGGT GTATCAACAA
TGCCAAGAGT TAGTGGATTC CCATGAAAAT GGTCCACTCT TGTTGTGGCG TGGTCGAGAG
ATGATAGAAA TCTTGATCAC CCTAAGCATG GATAAGCCGA CTTTAATTGC AGCTCAGTTA
TTTCCTTTAG TTTCATCTGG TGTGTTAGAC AGAGAAACGT TAACTGAAAA CTACAATAAA
GAAATAGAAA AACTGATTGA TGGCGTTGAA GAGATGGACG CGATTGGTCA GTTGAATGCG
TCTGTTGGGG AAGAGTCAGC CTCTTCCCAA GTCGATAATA TTCGTCGAAT GTTATTGGCT
ATGGTTGATG ATTTTCGTTG TGTGATCATT AAATTAGCTG AGCGTATTTG TAATTTACGT
GAAGTGAAAA ATGAACCTGA AGACGTTCGC CGAGCAGCGG CTAAAGAATG TAATAATCTT
TATGCTCCTT TAGCGAACCG TTTAGGTATT GGTCAGTTGA AATGGGAAAT TGAAGATTAC
TCTTTCCGTT ATCAGCATCC TGATACCTAT AAGAAAATAG CAAAACAATT GTCTGAGCGA
CGTATTGTTC GTGAACAATA TATCCATGAT TTTGTCACGG GGTTAAGTGA TGAAATGGCG
GGTTATAACA TCAATGCCGA AGTCAGTGGG CGTCCAAAGC ACATCTACAG TATCTGGCGT
AAAATGCAGA AGAAGAGCTT GGAATTTGAT GAATTGTTTG ATGTTCGAGC GGTTCGAATT
ATTGCGGATA AACTGCAAGA TTGTTATGCC GCATTAGGGG TTGTACACAC GAAGTTTAAG
CACTTACCAA GTGAATTTGA CGACTACGTT GCAAACCCAA AACCGAATGG CTATCAATCT
ATTCATACGG TTGTTTTAGG CCCTGAAGGG AAAACCATTG AAATCCAGAT CCGAACAAAG
GATATGCACG AAGACTCAGA ACTAGGGGTT GCTGCGCACT GGAAATACAA AGAAGGCTCA
TCAAACAGCA GTCGTACTGG TTATGATGAG AAGATTACGT GGCTACGTAA ACTGCTTGAT
TGGCAAGAAG AGATGTCAGA TTCTGGTGAA ATGCTGGATG AATTACGAAG TCAAGTGTTT
GATGATCGTG TTTATGCCTT TACCCCTCGT GGTGATGTTG TTGATCTACC AATGGGCGCG
ACACCTTTAG ATTTTGCGTA TCATATTCAC TCAGAAGTAG GGCACCGATG TATTGGTGCG
AAAGTGGGTG GACGAATCGT GCCATTTACC CATAACCTTG CAATGGGTGA CCAAGTTGAA
ATTATTACCC AAAAAGAACC GAACCCTTCT CGAGATTGGT TAAACCCAAC CTTGGGTTTT
GTGAACTCTG GCCGTGCTCG TGCAAAGATC AATGCCTGGT TTAGAAAACA GAGTCGTGAA
AAAAACCTTG ATGCAGGTAA AGAGATTTTA GAAGTTGAAT TAGCAAAAAT TGGCGCAACG
TTAAAAGATG CAGAGCAATA CGCACTTAAG CGCTTTAATG TGAATTCAAC GGATGAGTTG
TTTGCTGGTG TTGGTAGTGG CGACTTACGT ATTAACCAAG TGATTAATCA CATTAATGCG
TTAGTGAATA AACCAACCGC TGAGCAAGAA GATCAAAAAG CGTTAGAGCA ATTGCAAGAA
TCTGAAGCGA AGGCACAAGC ACAAGCTCAG GCGCAGAATA AAAAACGCAA TGATGCAGTG
GTGGTTGAAG GTGTCGATAA TTTAATGACG CACCTAGCAC GCTGTTGTCA GCCGATCCCT
GGTGATCCTA TCGCGGGGTA CATAACTCAA GGTCGTGGTA TTTCAGTTCA CCGCAGTGAT
TGTGATCAGC TTGATGAATT ACGTCATCAT GCTGCAGAAC GAATTATCGA CACGGTGTGG
GGGAGTGGTT TTGTTGGCTC TTATATATTG ACGTTAAGAG TCACAGCCAT GGATCGTTCT
GGTTTATTGA AGGATCTTAC CAGTCTGTTT GCGAATGAAA AAGTAAAAGT GTCTGGCATG
AAGAGCCGTA ATGATTACAA AAAGCAGCTG ACTATTATGG ATTTTGATCT TGAAGTGTTC
AGTGCTGACA TCCTTAGTCG ATTAATTACT CGTGTTGAAC AAGTAAAAGA TGTCATGGAA
GCCTCTCGAT TATCATAG
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| Protein sequence | MVAVRGAHLK ENETFELAEW IISLEQDKST SKKLTEVYQQ CQELVDSHEN GPLLLWRGRE
MIEILITLSM DKPTLIAAQL FPLVSSGVLD RETLTENYNK EIEKLIDGVE EMDAIGQLNA
SVGEESASSQ VDNIRRMLLA MVDDFRCVII KLAERICNLR EVKNEPEDVR RAAAKECNNL
YAPLANRLGI GQLKWEIEDY SFRYQHPDTY KKIAKQLSER RIVREQYIHD FVTGLSDEMA
GYNINAEVSG RPKHIYSIWR KMQKKSLEFD ELFDVRAVRI IADKLQDCYA ALGVVHTKFK
HLPSEFDDYV ANPKPNGYQS IHTVVLGPEG KTIEIQIRTK DMHEDSELGV AAHWKYKEGS
SNSSRTGYDE KITWLRKLLD WQEEMSDSGE MLDELRSQVF DDRVYAFTPR GDVVDLPMGA
TPLDFAYHIH SEVGHRCIGA KVGGRIVPFT HNLAMGDQVE IITQKEPNPS RDWLNPTLGF
VNSGRARAKI NAWFRKQSRE KNLDAGKEIL EVELAKIGAT LKDAEQYALK RFNVNSTDEL
FAGVGSGDLR INQVINHINA LVNKPTAEQE DQKALEQLQE SEAKAQAQAQ AQNKKRNDAV
VVEGVDNLMT HLARCCQPIP GDPIAGYITQ GRGISVHRSD CDQLDELRHH AAERIIDTVW
GSGFVGSYIL TLRVTAMDRS GLLKDLTSLF ANEKVKVSGM KSRNDYKKQL TIMDFDLEVF
SADILSRLIT RVEQVKDVME ASRLS
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