| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2512 |
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| Symbol | ispD |
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| ID | 6988727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2691154 |
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| End bp | 2691873 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380776 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002263860 |
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| Protein GI | 209695930 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.853147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTCAT TGTCTCCTTT ATTTATTACC GTAATCGTGC CTGCTGCAGG TGTTGGCAGC
CGAATGAAAG CCGATCGCCC AAAACAATAT TTAGTACTTG ATGGTAAAAC AGTCATTGAA
CATACCATTG AGAACTTATT GGCCTTTCCT ATGGTCAATA CTGTCATTGT TGCAATCAGC
GATGATGACC CATATTTTGA TGCGTTATCT ATTGCTACCG ATAAGAGAGT TATTCGAGTC
TCTGGTGGGG AAGAGCGTGC TGATTCTGTT CTTTCTGGTC TAGAATACGT ACAAAAAAAC
ACATTAAGTC AATGGGTGAT GGTTCATGAT GCGGCACGCC CTTGCCTTCG CCATAGCGAC
ATTGCTAAGT TAATTGAAGC CGTGATCCCG GATCATCTGG GTGGTATATT AGCCTCGCCA
GTTCGAGATA CGATGAAGCA GGCAAATTCA GATTTAAGCA TCAGTACAAC GATTGATCGC
AGTGTGTTGT GGCATGCATT AACACCGCAA CTGTTCACTA CCGAGTTATT GTATACCGCA
TTAAAAACAG GTTTAGAACA GGGCTTATCG ATTACGGATG AGTCTTCTGC TATCGAATTT
ATGGGATATC AGCCTAAACT CATACAAGGT CGGGCCGATA ACTTAAAAAT AACTCAACCT
GAAGATCTTG ATTTAGCAGA GTTCTACCTT CAAAAAATGA AAAAGGAAAT CAACGAATGA
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| Protein sequence | MSSLSPLFIT VIVPAAGVGS RMKADRPKQY LVLDGKTVIE HTIENLLAFP MVNTVIVAIS
DDDPYFDALS IATDKRVIRV SGGEERADSV LSGLEYVQKN TLSQWVMVHD AARPCLRHSD
IAKLIEAVIP DHLGGILASP VRDTMKQANS DLSISTTIDR SVLWHALTPQ LFTTELLYTA
LKTGLEQGLS ITDESSAIEF MGYQPKLIQG RADNLKITQP EDLDLAEFYL QKMKKEINE
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