Gene VSAL_I2507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2507 
Symbol 
ID6989186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2687197 
End bp2688189 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content41% 
IMG OID643380771 
Productlipoprotein 
Protein accessionYP_002263855 
Protein GI209695925 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA TAAAACAATA CTTCTCTTTC TCTTACTTGG GTGTGATAGC TCTTAGTTTA 
TTGCTTGTTG GCTGTTCATT GGGGCCACAT CGTCCTGCGC CAGTATCAAG CGTTAATAGT
AAGGCATCTT CTTATGGTGG CACTGAGCGT GGCAGCTATC GAGGAAGTTA CTACAAGGTT
GAAAGCGGGG ATACGTTATA TTTTATTTCA TATGTAACGA ATAAAGATGT TAAAGAGCTT
ATTGCATATA ACGAACTTAA AGCACCTTAT GTGATCCAGC CAGGACAAAA AATAAAATTA
TGGGGCCCTC GATATATTGC TCCTGCGTAC GGTGATGATG GCCATTCCGT TATTAAAGAG
AATGGTACCC CAAGGTCTAC TGCAACAGCG GTTGCCGTTG TTCCTGTTGC TACGAATAAA
GCACCGAGTA CGGCAAAACC CGTTACGTCC GCTAGCACAA AAACACAACC TGTTCAAAAA
CAAAGCACAA AAAAGGTTGA AAAGGCGAAA TCGAAGGAGT ATGTTGAATC TAACAAATCG
ATAACATCTT CTAAGCCGAA GCCGGTTGTT AAGCCAAAAC CGAAGCCAAC ACCGAAACCA
AAACCAGTAG AAAAAAAATC GGAGAAGGTA GATTCGTGGT TATGGCCAAC TAAAGGAAGA
ATCATTGCTA AGTTTTCAAC AGGAGACCAA GGAAATAAAG GGATAGATAT CGCAGGTCAA
CGTGGCCAAG AGATCATCTC AACCGCAAAA GGAACCGTGG TTTATGCAGG CAATGCATTA
AGAGGTTATG GCAACCTGAT AATTATTAAA CATAATGACG ATTACTTAAG TGCCTACGCC
CATAATGAAT CATTGTTTGT GAAAGAAGGT CAACACATCA ATGCGGGACA AAAAATCGCA
TCAATGGGTA GCTCAAGTAC GAGCAGCGTT CGTTTGCATT TTGAGATCCG TTTTAGAGGG
AAATCGGTAA ATCCACAACG GTATTTACCG TAA
 
Protein sequence
MDKIKQYFSF SYLGVIALSL LLVGCSLGPH RPAPVSSVNS KASSYGGTER GSYRGSYYKV 
ESGDTLYFIS YVTNKDVKEL IAYNELKAPY VIQPGQKIKL WGPRYIAPAY GDDGHSVIKE
NGTPRSTATA VAVVPVATNK APSTAKPVTS ASTKTQPVQK QSTKKVEKAK SKEYVESNKS
ITSSKPKPVV KPKPKPTPKP KPVEKKSEKV DSWLWPTKGR IIAKFSTGDQ GNKGIDIAGQ
RGQEIISTAK GTVVYAGNAL RGYGNLIIIK HNDDYLSAYA HNESLFVKEG QHINAGQKIA
SMGSSSTSSV RLHFEIRFRG KSVNPQRYLP