| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2492 |
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| Symbol | cadB |
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| ID | 6988296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2669762 |
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| End bp | 2671099 |
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| Gene Length | 1338 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643380756 |
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| Product | lysine/cadaverine antiporter |
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| Protein accession | YP_002263840 |
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| Protein GI | 209695910 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAT CGAATACCAA AAAAATTGGC TTAATTGCCT GTACTGGCGT TGTTGCCGGC
AACATGATGG GGAGCGGTAT TGCACTATTA CCTTCTTCAT TAGCAGCTGT TGGCTCAATT
TCAATTTTTA GTTGGATCAT TTGTTTAGTT GGTGCGTTGA GTTTGGCATT TGTTTTTGCT
CGCTTAGCAA CAAAGAACCC ACAAGAAGGT GGTCCAATCG CTTACGCTGG TGAAGTTGCT
CCTGTGTTTG GTTTCCAAAC TGGGGTTCTT TACTACCACG CAAACTGGAT TGGTAACTTA
GCCATCGCCA TTACTGGTGT GTCTTATTTA TCTGTTTTCT TCCCAGCTTT AAGTCATCCA
ATCCCTGCTG CAATAGCAAC GGTTGCGTCT GTATGGATAT TTACCTTTGT AAACTTACTC
GGTGGTAGCT GGGTTAGTCG TCTTTGTACT CTAGGTCTCG GGCTTATCCT TATTCCAGTT
GTTGGTACCG CTGTTGCTGG TTGGGGGCAT TTTGATATGG CCATTTACAA CCAAAACTGG
AACGTATCAT CAGGCACAAA CAGCCATGCT GTTATCAGTG CGGTATTGAT TTGTTTATGG
TCATTTGTTG GTGTTGAATC AGCCGCTGTA TCATCTGGTA TGGTAAAAAA TCCAAAACGC
ACGGTTCCTC TAGCAACCAT GTTGGGTACA GCGATTGCGG GTATTATTTA TATCCTATCT
ACTCAAGTTA TTGGTGGTAT GTTCCCGGCG TCTGAAGTCG CTGCATCAAG TGCACCTTTC
GCACTGGCAA CAACAGAAAT CTTCGGTAGC TGGTCTGCTC CATTCGTTTC TGCATTTACT
GCACTTGCGT GTTTCACTTC TCTTGGTTCT TGGATGATGT TGGTTGGTGA GGCCGGTAAA
CGTGCTGCTA ACGATGGCAA CTTCCCTAAA ATCTATGGCG AAACTGATAA AAATGGCGTA
GCGAAAAAAG GGCTTATCTT AGCATCGTTA AAAATGACAG CGCTAATGAT TGTACTTACT
GCGTTCAGTT CTCAATCTGC TCATACTGCT GACTTATTTA ATCAGCTAAC AACAGATGCC
GTACTACTAA CAATGCTTCC TTACTTCTAC TCAAGCATTA ACTTAATTCG CTTTGAAGGT
ATGACTACTC GTAGTGGCTT TACGATGATG TTCTCTGGCG TGGCTTGTGT GTTCTGTATG
ATTGCGCTTG CTGGTGCAGA AGGTGCAACA CTGACTGCAA CCTTTATCGT GTCACTGGTT
ATCCTTATGT TCTACGCAAA AAAAATGGGC TTGAAACAAG CCGAGCAACA CATAAGCACT
GAAGCTGCTG CCCATTAA
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| Protein sequence | MESNTKKIGL IACTGVVAGN MMGSGIALLP SSLAAVGSIS IFSWIICLVG ALSLAFVFAR
LATKNPQEGG PIAYAGEVAP VFGFQTGVLY YHANWIGNLA IAITGVSYLS VFFPALSHPI
PAAIATVASV WIFTFVNLLG GSWVSRLCTL GLGLILIPVV GTAVAGWGHF DMAIYNQNWN
VSSGTNSHAV ISAVLICLWS FVGVESAAVS SGMVKNPKRT VPLATMLGTA IAGIIYILST
QVIGGMFPAS EVAASSAPFA LATTEIFGSW SAPFVSAFTA LACFTSLGSW MMLVGEAGKR
AANDGNFPKI YGETDKNGVA KKGLILASLK MTALMIVLTA FSSQSAHTAD LFNQLTTDAV
LLTMLPYFYS SINLIRFEGM TTRSGFTMMF SGVACVFCMI ALAGAEGATL TATFIVSLVI
LMFYAKKMGL KQAEQHISTE AAAH
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