| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2491 |
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| Symbol | cadA |
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| ID | 6988956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2667505 |
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| End bp | 2669643 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380755 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_002263839 |
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| Protein GI | 209695909 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTT TTGCTATCCT AAACCACTCA GGTGTTTTCT TTAAAGAAGA GCCAGTTCGC
GAACTTCATG CTTCTTTAGA AAAAGCAGGC TACAAAGTTG TTTACCCAGT AGACGCACAA
GATTTGTATA AAATGGTTGA AATGAACCCA CGTATTTGTG GTGTGTTATT TGACTGGGAT
AAATACTCAT TAGACTTATG TACTGAAATT AATGTCTTGA ATGAAAAATT GCCTTTGTAT
GCCTTTGCAA ACCAACATTC AACGTTAGAT ATTTCATTAA CGGATTTACG TCTAAATCTT
CATTTCTTCG AATATGCATT AGGCATGGCC GATGATATCG CTCTGAAAAT TAATCAAGCG
ACTGAAGAAT ACATAGATCA AATCATGCCT CCTTTTACTA AGGCACTATT CAAATATGTA
GAAGAAGGTA AATATACGTT CTGTACTCCG GGTCACATGG GCGGTACTGC TTTCCAAAAA
AGTCCAGCAG GCAGCATCTT CTATGATTTC TACGGTCCAA ACGCATTTAA AGCGGATGTC
TCAATTTCAA TGCCTGAACT AGGTTCATTG CTTGATCACT CTGGTCCTCA TAAAGAAGCA
GAAGAGTATA TTGCTCGCAC GTTTAATGCA GACAGCTCTT ACATCGTAAC GAACGGTACG
TCTACTTCAA ATAAAATTGT AGGTATGTTT TCTGCACCAG CAGGCAGCAC AGTACTTGTT
GACCGTAACT GTCACAAATC TTTGACTCAC ATGATGATGA TGAGTGATGT AACCCCTATC
TATTTCCGTC CAACGCGTAA CGCTTACGGT ATTTTAGGTG GCATTCCTCA AAGTGAATTC
ACTCGTGAAG TGATTGAAGC AAAAGTAGCA GCAACACCAA ACGCAACTAT GCCTGGTTAT
GCGGTTATTA CTAACTCTAC TTACGATGGC TTGTTGTATA ACACTCAATA CATCAAAGAA
ACGCTAGACA CTAAATTCAT CCACTTCGAC AGTGCTTGGG TTCCTTACAC TAACTTCAAC
TCTATTTACG AAGGTAAATG TGGTATGAGT GGTGAAGCGA TGCCGGGTAA AGTGTTCTAT
GAAACACAAT CAACTCATAA ATTATTGGCT GCGTTCTCTC AAGCATCAAT GATCCACGTG
AAAGGTGAGT TTGATAAAGA ATCTTTCAAC GAAGCCTTCA TGATGCACAC ATCAACATCA
CCTCAATACG GTATTGTTGC ATCAACAGAA ATTGCTGCGG CGATGATGCG CGGTAATACA
GGTAAGAAAC TGATCCAAGA CTCTATTGAC CGTGCGATTC GTTTCCGTAA AGAGATCAAA
CGTCTAGAAA GTGAAAGTGA CAGCTGGTTC TTCGATGTAT GGCAACCAGA AAATATCGAT
ACAACAGAAT GTTGGAAACT GGATCCTAAA GATACATGGC ATGGTTTTAA AGACATCGAT
GATGACCACA TGTACCTTGA TCCAATCAAA GTAACGCTAT TAACTCCAGG AATGAACGAA
AATAGCGAAA TGAGTGAAAC AGGTATCCCT GCTTCTATCG TTGCTAAATA CTTAGATGAA
CACGGTATTG TAGTAGAGAA AACAGGTCCA TATAACCTAT TATTCTTGTT CTCTATCGGT
ATTGATAAAT CAAAAGCAAT GCAATTACTG CGTGCGTTAA CTGACTTTAA ACGTGGCTAT
GATCTAAACT TAACAGTGAA AAACTTCTTA CCTTCACTGT ACAACGAAGA TCCAAGCTTC
TACGAAGGCA TGCGCATTCA AGAACTGGCA CAAGGCATTC ACGATCTTAC TCGTCAATAC
CGTTTACCAG AATTGATGTT CAAAGCGTTT GATGTATTAC CTGAACTAAA AGTAACGCCA
CACGCAGCAT GGCAAGAAGA GCTACGCGGC AATGTGGAAG AAGTGAAACT GGAAGAAATG
GTTGGTCGCG TAAGTGCCAA TATGATCCTT CCTTATCCTC CAGGTGTTCC ACTAGTACTT
CCTGGTGAAA TGGTAACAAC AGAATCTCGT CCAGTACTTG ATTTCTTAGA GATGCTATGT
GCAATCGGCG CTCATTACCC AGGTTTTGAA ACGGATATTC ACGGTGTATA TGCTCAAAAA
GATGGCAGTT ACACAGTGAA AGTATTAAAA GAAGATTAA
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| Protein sequence | MNIFAILNHS GVFFKEEPVR ELHASLEKAG YKVVYPVDAQ DLYKMVEMNP RICGVLFDWD
KYSLDLCTEI NVLNEKLPLY AFANQHSTLD ISLTDLRLNL HFFEYALGMA DDIALKINQA
TEEYIDQIMP PFTKALFKYV EEGKYTFCTP GHMGGTAFQK SPAGSIFYDF YGPNAFKADV
SISMPELGSL LDHSGPHKEA EEYIARTFNA DSSYIVTNGT STSNKIVGMF SAPAGSTVLV
DRNCHKSLTH MMMMSDVTPI YFRPTRNAYG ILGGIPQSEF TREVIEAKVA ATPNATMPGY
AVITNSTYDG LLYNTQYIKE TLDTKFIHFD SAWVPYTNFN SIYEGKCGMS GEAMPGKVFY
ETQSTHKLLA AFSQASMIHV KGEFDKESFN EAFMMHTSTS PQYGIVASTE IAAAMMRGNT
GKKLIQDSID RAIRFRKEIK RLESESDSWF FDVWQPENID TTECWKLDPK DTWHGFKDID
DDHMYLDPIK VTLLTPGMNE NSEMSETGIP ASIVAKYLDE HGIVVEKTGP YNLLFLFSIG
IDKSKAMQLL RALTDFKRGY DLNLTVKNFL PSLYNEDPSF YEGMRIQELA QGIHDLTRQY
RLPELMFKAF DVLPELKVTP HAAWQEELRG NVEEVKLEEM VGRVSANMIL PYPPGVPLVL
PGEMVTTESR PVLDFLEMLC AIGAHYPGFE TDIHGVYAQK DGSYTVKVLK ED
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