| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2482 |
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| Symbol | |
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| ID | 6987777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2656578 |
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| End bp | 2659508 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 643380748 |
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| Product | putative ABC transporter, ATP-binding domain |
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| Protein accession | YP_002263832 |
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| Protein GI | 209695902 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.169992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGTT TTAAAGAAAT ACAAGAAATT TTAGGTACGC AGCCTGATGT GAAAAAAATA
TACCTTATAG GCTGTACAGG TGCAGGTAAA ACATCACTGG TTCAACATAT CATAGGCTCT
AAAAAACACG GTTTTCCGGT GACTAGTCAT AGACGAACTA CGATTGCACC TACTGAATAT
GTAATTCAAA AAAACATTCC TTTTAAAACA ACAATTATTT TAAAAAATAA GAATGATGTA
GTTTTTGCAA TAGAGGAATT AATTCAAGGA GCTATATTAA AAGCTAAGCA AGATAAAGCG
ACCACTGAAG ATGTGGTTTT TGAATTAGAA CAATCCCCCG ATGACCGATT TAAGCTGAAT
CAAATGGTTA AAGGTGAAAC GTTTGTAAAA GTTGCAAATG ACATTATTAC GAATGTATTA
CCGCCTATAA GTGGTAAAGA TATTAACGAT GAAACGTTGC TATCAGACTC ATTTATTAAA
GATGAAATAA AGAAAATTGT TACTGAAATT TTAGCTGAAA TTGAAGCTAA CTTTAATAGA
GCGTGCGGAA ATGGTCATAC GCTATTTACA AATAAAACGT TAACGATAGA TGGTATTAGT
GACAAAGATG AATTTATACT GAAAACTAAG AAACTCTTAA GCCATGATTT TGGTTCTATT
TCTATATTAG CTGAATATAT ACGCATTGAA GGCGACTTGT TAGCTGATTG GCTTGATCCT
AACCTAGAGT TTTTATTAAT TGATGGAGAG GGGATTGGGC ACTCTTTAGG TGAAAAAAGA
GATACGCTAT CTTCACGTCA TTACAATTTT TTTAATTATT GTAATAATAT TGTATTAATT
GATGATGCGA ATGATCCGTT TGCGGCTGGT GGTCATGGTG CAATTGAGGG GATATTCTTA
AACGGGTATC AAGAGAAATT TAAATTAGTA TTCTCTAAAA CAGATAAACT TGAGCAGACA
GATCTGAATG CATACTTTAG ACGTAGTTTA AATAATCTTA GAAATGCGCT AAAAAAAGAT
GAAATAGAAT TTAATGAAGA AAACAAAGAT ACTTACAAAC TAAATGCGCT TGATGATAAA
AACATTAATG ATGAATCTAG AAAAACAATA CAACGGCTAT TAACTAACAT TAGTAATAGT
AAAAAAAAGC ACTTAACCCC TTTAGAATAT GATTTTGACT TACTGCTTTC TAAATACAAT
AGTGAGACAT TGGTATCAAC TATTGTTAAT AGAATTGAAG AGGAACATTG GGCTGTAGTT
AAAGCTCTTT CAAAACGACT TCAGAGTGCA GATATTGAAT ATAGGCATTT AAAACCAATT
AGCTGGATTC TGATTTTTTT GATGCATGAA CTTAACTCTT TTCTTAAAAG AGATGAACTA
ACTTCTGAAG TATTTGATAG TCAAAATATA ATCAAACAGA ATGTATCTCA CCGATTGGTA
CAGTATATAT ATACTAATTT TGTAAAAGAG AAAGAGCACT TGTGGCAACA AGCATATGAA
AAAAGTGGTT TTGGCTCTCA CAGAGAACGG AAAGATTTTA TCTTTAATCA AATAGTTAGG
GTTTTTTTAC CTAGTAAAGA TAAAGAGGAT GCATTTAAAT CATTTAAGAA AGACATTAAA
AGCTTACTAT TAAAGTCAGG AGCACTTGAG CTAAAGACTG CGGTAAAAAC TGAAATTACT
CATGTATCTA TAAAAAAAAT ATTTGGATCT AAAAACGTTG AATGGTCGTT AGGTGATGAT
GTTAATGTCT TAATTGGTAA GAATGGTTGT GGCAAATCAA CTTTGTTAAA ACTCATTTTT
GCTTGTATTA ATAATGATGA GGAAACATTA GAGTCATTTA GGTCTCCATA TGTAGAATTA
ACAATTTTAA AAACCTTTGA TAATGGTGAA ACTCAAATAT CTAAAATATC ACAAAGTAAA
TCACCATCAA AAATTAATGC TGTCATGGTG AATACATTCG ATATTAAGTT AGATCGGCAG
AACAATGATG TAGTTGACTT AGATAGTCAG TTACTGAAAC TAACAGGAGA GCTAGAAGGA
TTTCAGCGTG GTCTATTACA ATCAATTAAT AAAACTGTTG GAGAACAAAT TAAGCAACGA
GATGAGGCAA TAAGTAAACT TACAACTGCT ACTCCTGATG ATTTTGCTCG TTTACAAGAA
CTAAGCATTC AAATAAATGA TGCAACGACA AAAATATATA AACCGTTGAT TGAGTTTAAG
TCAATTATTG ATGAGTATTT TTCAGGTACA AATAAATCGA TAATTATTGA TGATGAAGAG
TTCCCATTAG TTGTCGAAGT TGAAAATAAT TCTCACCATA TTAAAGTGAC GGATTTGTCG
TCAGGTGAAA AGCAACTTTT AATTATCTTC TTAACGGTGA TTCTACAAAA GAATAAATCA
TTTATATTAT TAATGGATGA GCCAGAAACA TCCTTACATG TAGAGTGGCA AGCAACGTTT
ATTGATTTTA TTAAGAAATT AAATCCTAAC GTACAAATTA TTATTGCGAC TCATAACCCT
CTTATTTTGT TGAATAGAGA AAGTGATGAA ATAGGAATTA TTGAAGCAAA TAATGATGAA
GTGCAAAAAA GAACAAGTGG AACTAAGTAC CTAGATATAT CATCAATCTT GTTAGACCAT
TTTAAATTAC CATCTTTGGT TGGCACTCAA ATGCAAAATG ATATCCAGCG TTTTAGTGCG
CTTAAGATGC GAGAGCCTGA ATTAAATTTG GAAGAGAAAA ATCAGTTATC TGACCTTGGT
GAATTATTAG AAAATAGTTT GGCTGGTGAT ATGATTTATA ATAAAAAATA TTTCGATTTT
TTAACCTTTC TTAAAAATAA CAAGCACATC AGTTATGAAC AATATGAAGC TTCTTCAGAG
CAGGATATGG CAGACTTCTT AAGTGAGTTT GGAGGCTCAT TCAATGATTG A
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| Protein sequence | MRSFKEIQEI LGTQPDVKKI YLIGCTGAGK TSLVQHIIGS KKHGFPVTSH RRTTIAPTEY
VIQKNIPFKT TIILKNKNDV VFAIEELIQG AILKAKQDKA TTEDVVFELE QSPDDRFKLN
QMVKGETFVK VANDIITNVL PPISGKDIND ETLLSDSFIK DEIKKIVTEI LAEIEANFNR
ACGNGHTLFT NKTLTIDGIS DKDEFILKTK KLLSHDFGSI SILAEYIRIE GDLLADWLDP
NLEFLLIDGE GIGHSLGEKR DTLSSRHYNF FNYCNNIVLI DDANDPFAAG GHGAIEGIFL
NGYQEKFKLV FSKTDKLEQT DLNAYFRRSL NNLRNALKKD EIEFNEENKD TYKLNALDDK
NINDESRKTI QRLLTNISNS KKKHLTPLEY DFDLLLSKYN SETLVSTIVN RIEEEHWAVV
KALSKRLQSA DIEYRHLKPI SWILIFLMHE LNSFLKRDEL TSEVFDSQNI IKQNVSHRLV
QYIYTNFVKE KEHLWQQAYE KSGFGSHRER KDFIFNQIVR VFLPSKDKED AFKSFKKDIK
SLLLKSGALE LKTAVKTEIT HVSIKKIFGS KNVEWSLGDD VNVLIGKNGC GKSTLLKLIF
ACINNDEETL ESFRSPYVEL TILKTFDNGE TQISKISQSK SPSKINAVMV NTFDIKLDRQ
NNDVVDLDSQ LLKLTGELEG FQRGLLQSIN KTVGEQIKQR DEAISKLTTA TPDDFARLQE
LSIQINDATT KIYKPLIEFK SIIDEYFSGT NKSIIIDDEE FPLVVEVENN SHHIKVTDLS
SGEKQLLIIF LTVILQKNKS FILLMDEPET SLHVEWQATF IDFIKKLNPN VQIIIATHNP
LILLNRESDE IGIIEANNDE VQKRTSGTKY LDISSILLDH FKLPSLVGTQ MQNDIQRFSA
LKMREPELNL EEKNQLSDLG ELLENSLAGD MIYNKKYFDF LTFLKNNKHI SYEQYEASSE
QDMADFLSEF GGSFND
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