Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2466 |
Symbol | |
ID | 6987768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2639534 |
End bp | 2640922 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643380733 |
Product | peptidase |
Protein accession | YP_002263817 |
Protein GI | 209695887 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAC CAGAACTACT TTCGCCAGCT GGCAGCCTTA AAAATATGCG TTACGCGTTT GCTTACGGTG CTGATGCTGT CTATGCAGGC CAACCACGTT ACAGCCTTCG TGTTCGTAAC AACGAATTCA ACCATGAAAA CCTAGAGATC GGTATTAACG AAGCGCATGC GCAAGGTAAA AAACTGTATG TGGTATGTAA CATCCAACCA CATAACTCAA AGTTAAAAAC CTTTATTCGT GATTTAACCC CTATCGTAGC AATGGGCCCT GATGCCTTAA TCATGTCTGA TCCTGGTTTA ATCATGATGG TTCGTGAAGC TTTCCCTGAG GTTGTTATTC ACCTATCAGT TCAAGCTAAC GCAGTTAACT GGGCAACCGT GAAGTTCTGG TCAACTCAAG GGGTTGAACG TGTGATCTTA TCTCGTGAAT TATCACTAGA AGAAATTGAA GAGATCCGTG AAAACTGTCC TGATACCGAA TTAGAAATTT TTGTACACGG TGCGTTATGC ATGGCGTACT CTGGTCGATG CTTACTTTCT GGCTACATGA ACAAGCGCGA TCCAAACCAA GGCACATGTA CAAATGCATG TCGTTGGGAA TACAAAGCTG AAGAAGCAAA AGAAGACGAA AACGGTCAAA TCGTTGAAGC TAATCCTATC GGTGTTGAGA TTCAAGACGT AGAAGTTCAA GAAGAACGTC CCGACAATAC ATTAGGTTTA GGCAAACCAA CTGACGAAGT GGTTCTTCTT TCTGAAGCAC ACCGCCCTGA AGAGAAAATG GCTGCATTTG AAGATGAGCA TGGTACTTAC ATCATGAACT CTAAAGATCT TCGTGCTATC CAACACGTAG AGCGTCTAAC CAAGATGGGC GTTCACTCGC TTAAAATCGA AGGTCGTACT AAGTCTTTCT ATTACTGTGC GCGTACTGCT CAAGTATATC GTAAGGCGAT TGATGATGCG GTTGCAGGTA AACCATTTGA TGAAAGCCTA ATGGGGACAC TAGAGAGCCT AGCTCACCGT GGTTACACCG AAGGTTTCTT ACGTCGTCAT ACACATGATA CATACCAAAA CTACGATTAC GGTTACTCTA TCTCTGATTC TCAGCAATTC GTTGGTGAAT TCACGGGGAA ACGTCGTGGT GATTTAGCGG AAGTTGATGT TAAAAACAAA TTCCTAGTGG GCGACTCTAT TGAGATCATG ACGCCACAAG GTAACTTAAC CTTCACGCTA GAAATGATGG AAAACCGTAA GAGTGAAGCC GTTGATTCAG CGAAAGGAAA TGGCCACTTT GTGTTCATCC CTGTTCCTGC AAACGTAGAT TTAGAATACG GTCTATTAAT GCGTAACTTA CACACGGGTG AAGACACTCG TAACCCACAC GGTAAGTAA
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Protein sequence | MFKPELLSPA GSLKNMRYAF AYGADAVYAG QPRYSLRVRN NEFNHENLEI GINEAHAQGK KLYVVCNIQP HNSKLKTFIR DLTPIVAMGP DALIMSDPGL IMMVREAFPE VVIHLSVQAN AVNWATVKFW STQGVERVIL SRELSLEEIE EIRENCPDTE LEIFVHGALC MAYSGRCLLS GYMNKRDPNQ GTCTNACRWE YKAEEAKEDE NGQIVEANPI GVEIQDVEVQ EERPDNTLGL GKPTDEVVLL SEAHRPEEKM AAFEDEHGTY IMNSKDLRAI QHVERLTKMG VHSLKIEGRT KSFYYCARTA QVYRKAIDDA VAGKPFDESL MGTLESLAHR GYTEGFLRRH THDTYQNYDY GYSISDSQQF VGEFTGKRRG DLAEVDVKNK FLVGDSIEIM TPQGNLTFTL EMMENRKSEA VDSAKGNGHF VFIPVPANVD LEYGLLMRNL HTGEDTRNPH GK
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