| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2465 |
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| Symbol | |
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| ID | 6987767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2638373 |
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| End bp | 2639383 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643380732 |
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| Product | HTH-type transcriptional regulator, LacI-family |
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| Protein accession | YP_002263816 |
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| Protein GI | 209695886 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTTC CAAAATTAAT GATAACGTCT AAAGACGTAG CAAAACTTGC CGGAGTTTCT
CAATCTACGG TTTCTCGTGT TTTTATTCCT GGTAGCTCCG CATCAGAAAA AACAAAGCAA
AAGGTATTTG AAGCAGCAAA AGCCTTAAAC TACCGACCAA ATGCATTTGC CCGCAGTTTA
ACGACCAATG AATCGAAACT TATTGGTTTA GTTTTTCCTG ATGCCGACTA CCCAATCCAC
ATGAAAACAC TGCAATTAAT CTCTAATGAA TTACAGAAAA AAGGATTTTC AGCCGTATTG
ATCCCATGGC AACTAGATGA AGATAAACAA CATTCAATTC CTAATATCTT TCAGTACCGA
GTTGATGGTG TCATTGCCGC TTCAGCAACG CTCAACAAAT CGTTATACGA AGAATGTGAA
GAGTTTAATA TTCCTATTAT TCAATACGCC CGAGTAGTCG AAGGAACAAA AAGCAGTTAT
GTCATTAGTG ATAACTACAC CGCAGGTCAA ATAGCCGCTC AACATTTTCA TAAAAGCAAT
GTGAAATCGG CATTATATTT AACTGGTGAA GTACCTACAT TTACTAACGA CGAACGTAAA
TTTGGTTTTT GCACGACTTT CGAAGAATTA ACAGGGAATA AAGCTCAAGT AGTCGAAGCA
ACTTATGATT ATTCTGATTC AATCGATACT ATTCGACAAT TATTTTCTCA ACCTCATCGA
CCTGAAGCTA TCTTTTGCGC GACGGATAAT TTAGCGATGG CAGCCATGGA TGTGGCTCGT
TTAGAGTGCG GCTTGCGCAT ACCAGAAGAT CTTCAAGTAA TTGGATTCGA TAATATTCCT
CAAACCGAGT GGCTAAATTA TCAACTCACG ACCTTTAAAC AAGATTTTCA ACGTTTAGCA
CGTGAATCCG TTAAGATCAT TGTAGATCAG ATAGAAAACA AAAATACAAA CCTAGTAAGA
TTAATGATAC CAGTCGCTTT TGTTGAACGA AAAACGACAA TACAAAGTTA A
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| Protein sequence | MTLPKLMITS KDVAKLAGVS QSTVSRVFIP GSSASEKTKQ KVFEAAKALN YRPNAFARSL
TTNESKLIGL VFPDADYPIH MKTLQLISNE LQKKGFSAVL IPWQLDEDKQ HSIPNIFQYR
VDGVIAASAT LNKSLYEECE EFNIPIIQYA RVVEGTKSSY VISDNYTAGQ IAAQHFHKSN
VKSALYLTGE VPTFTNDERK FGFCTTFEEL TGNKAQVVEA TYDYSDSIDT IRQLFSQPHR
PEAIFCATDN LAMAAMDVAR LECGLRIPED LQVIGFDNIP QTEWLNYQLT TFKQDFQRLA
RESVKIIVDQ IENKNTNLVR LMIPVAFVER KTTIQS
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