| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2456 |
|---|
| Symbol | phoR |
|---|
| ID | 6987762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2628402 |
|---|
| End bp | 2629700 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643380725 |
|---|
| Product | phosphate regulon sensor protein |
|---|
| Protein accession | YP_002263809 |
|---|
| Protein GI | 209695879 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02966] phosphate regulon sensor kinase PhoR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAGC GTCTGTCATG GAAAAAGCTG GTTGGAGAAT TGGCTTTTTT CTATGTTCCT
TGGATTATTG TAGGGTACTT ATTTGATGCC TTATGGCCAT TGTTGTTTCT CGCGTCGTTT
ATTTTATTGA TTTGGCATTT GCACAATCAA ATTAAAATGT CTCGTTGGTT ACATGAAGGA
CGAAAAGCCA CTCCGCCCTC AGCTTCTGGC AGTTGGGAGC CTATTTTTGA TGAAACTTAT
CGTTTACAAA AACGTCATAA AAAACGCCGT AAAGAGTTAT CTGTTTTAAT TCGACGATTC
CGACAAGGGG CAGAAGCATT GCCTGATGCC GTGGTGGTAT TTCGTCATGA AGGTAACATT
GTGTGGTGTA ATTCTTTAGC GCAATCGCTA TTGGGCTTTC GTTGGCCTGA AGATTCGGGT
CATCCGATAA CGAATTTAAT TAGACCCCCT GATTTTGTAC AGTATTTATT GGCGCAACAA
TTTGATATTC CATTGGATAT GCCATCGCCA ATTAATTCAG ACAAAACCTT AGAAATACGT
ATCGCACCTT ACAGTGAAGG CGAGTACTTG ATGGTGGTGC GTGATGTTAC TCAAATCAAG
CAGCTCGAAG GCATGCGCCG TAATTTCTTT GCCAATGTAT CGCATGAGCT ACGTACACCA
ATGACGGTGC TTCGTGGTTA TTTAGAAATG TCAGAAGATC CAGACATGCT TGTTGGCCCT
ATGTGGAATA GAGCGCACGG AGTCATGACA GAACAATTAA CTCGGATGGA GGGGTTAGTT
GAGCAACTAT TAACGCTTTC TAAAATTGAA GCCGCCGCAA CATCGATGTT AGAAGATGAA
GTTGATGTAC CGGCAATGCT TGATATTTTA GAGAAAGAAG CACAGGCGTT AAGTGGTGAT
AGAAACCATA ATATTACGTT TAATATTGAT CGCTTGCTTA AAGTTCAAGG CGATGAAGAT
CAATTACGAA GCGCGATTTC TAATTTGGTA TACAACGCGG TTAAGCATAC AACGGATGGT
GCAAATATCG TCATTGATTG GCGTCTTTCT TCTGCGGGAG CGAAACTTAA AGTTACGGAC
AGCGGACAAG GGATTGAAGC GCAACATATT CATCGTTTAA CCGAGCGTTT TTATCGAGTA
GATAAAGCTC GTTCAAGAGA AACTGGTGGC AGTGGTTTAG GATTAGCTAT TGTAAAACAT
GCGCTTAGCC ATCATGATTC GCAATTAGAA ATACAAAGCA AACTGGGTAA AGGGAGCACT
TTCTCGTTTG TATTACCGAA AAAACTCATT CTAAAGTAG
|
|---|
| Protein sequence | MVERLSWKKL VGELAFFYVP WIIVGYLFDA LWPLLFLASF ILLIWHLHNQ IKMSRWLHEG
RKATPPSASG SWEPIFDETY RLQKRHKKRR KELSVLIRRF RQGAEALPDA VVVFRHEGNI
VWCNSLAQSL LGFRWPEDSG HPITNLIRPP DFVQYLLAQQ FDIPLDMPSP INSDKTLEIR
IAPYSEGEYL MVVRDVTQIK QLEGMRRNFF ANVSHELRTP MTVLRGYLEM SEDPDMLVGP
MWNRAHGVMT EQLTRMEGLV EQLLTLSKIE AAATSMLEDE VDVPAMLDIL EKEAQALSGD
RNHNITFNID RLLKVQGDED QLRSAISNLV YNAVKHTTDG ANIVIDWRLS SAGAKLKVTD
SGQGIEAQHI HRLTERFYRV DKARSRETGG SGLGLAIVKH ALSHHDSQLE IQSKLGKGST
FSFVLPKKLI LK
|
|---|
| |