| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2439 |
|---|
| Symbol | aceB |
|---|
| ID | 6988213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2611482 |
|---|
| End bp | 2613086 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643380709 |
|---|
| Product | malate synthase |
|---|
| Protein accession | YP_002263793 |
|---|
| Protein GI | 209695863 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2225] Malate synthase |
|---|
| TIGRFAM ID | [TIGR01344] malate synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATA CCATGACAAC CACAGAACAA TCACTCTCAA TAATTGCTCC TAATAGCTTA
CAAAGAGAAG AAATATTAAC GTCTGGCGCA ATACGTTTCC TTACTCATGT TGTCGATAAG
TTTGCTCACC GCATTCCAGA ATTACTTAAT ACTCGTCAGG ATCGTCAGAG ACAAATTGAT
GCAGGCCAAT TGCCCGATTT TTTACAAGAA ACGCGCTCTA TTCGAGAATC TGAATGGACG
ATTCAAGGGA TACCCACTGA CCTTCAAGAC CGAAGAGTTG AAATTACTGG ACCGACAGAT
AGAAAAATGG TGATCAATGC ATTGAATGCG AATGTAAAAG TATTCATGGC CGATTTTGAA
GATTCATTAG CACCTTCTTG GGAGGCTGTG CTAGATGGAC AGATAAACCT GAGAGATGCA
ATGAACGGCA CGATTCAGTA CACCAACCCA GAAACGGGGA AGGTGTACCA ACTAAAACAA
GATCCTGCTG TATTGATTTG TCGCGTTCGT GGTCTACATC TTCCTGAAAA ACATGTGCTA
TTTAATGGTG TACCTATTCC CGGTGCTTTA TTTGATTTTG CTCTCTATTT TTACCACAAT
TATCAAACGT CATTAAAGAA AGGCAGTGGT CCTTACTTTT ATCTGCCTAA ATTACAAGCT
TACCAAGAAG CCGCGTGGTG GAGTGATGTG TTTAGTTTTG CAGAGCGAGA ATTCGGATTA
AAGCAAGGCA CAATAAAAGC AACAGTATTG ATTGAAACAT TGCCTGCTGT GTTTGAGATG
GATGAAATAT TATATAGCCT TAAAGAGCAT ATTGTTGGAT TGAACTGTGG TCGATGGGAT
TACATTTTTA GCTACATTAA AACACTTAAA AATCATCCCG ACCGTGTATT GCCCGATCGC
CAAGCGGTGA CAATGGAAAA ACCGTTTTTA AATGCCTATT CACGATTACT GATCAGAACC
TGTCACCGAA GAGCCGCATT TGCGATGGGA GGAATGGCCG CCTTTATTCC ATCAAAAGAC
CCGGTAAAAA ATGATTGGGT TTTAAATAAA ATTAAAACGG ATAAATCATT AGAAGCAAAT
AATGGACACG ACGGAAGTTG GGTTGCTCAT CCGGGACTGG CTGATACCGC AAGAGCTGAA
TTTGACAAGG TATTGGGTGA GCGCTCTAAC CAGTTAGACA TTAGCCGAGA TACTGATGCG
CCAATTACGG CTGAAGAACT ATTAGCACGG TGTGAAGGCG AAAGAACAGA AGAGGGAATG
CGTCATAATA TTCGAGTCGC AGTTCAATAC ATTGAAGCGT GGATAACGGG TAATGGATGC
GTCCCTATTT ATGGATTAAT GGAAGATGCC GCAACGGCAG AAATATCACG AACGTCTATT
TGGCAATGGA TACAACATGG AAAGACACTA GATAACGGTG ACACAGTGAC CGCGGATCTG
TTTAGAACCA TGTTATTAGA AGAAATGAAA ATAATAGAAG AGGAGTTGGG AACTGAACGT
TTTGATTCAG GACAATTTAT TCAAGCAGCA AAACTGATGG AGCAATTAAC CACCAGCGAT
CAACTAACGG ACTTTTTAAC ACTCACTGGC TATGACTATT TATAA
|
|---|
| Protein sequence | MTDTMTTTEQ SLSIIAPNSL QREEILTSGA IRFLTHVVDK FAHRIPELLN TRQDRQRQID
AGQLPDFLQE TRSIRESEWT IQGIPTDLQD RRVEITGPTD RKMVINALNA NVKVFMADFE
DSLAPSWEAV LDGQINLRDA MNGTIQYTNP ETGKVYQLKQ DPAVLICRVR GLHLPEKHVL
FNGVPIPGAL FDFALYFYHN YQTSLKKGSG PYFYLPKLQA YQEAAWWSDV FSFAEREFGL
KQGTIKATVL IETLPAVFEM DEILYSLKEH IVGLNCGRWD YIFSYIKTLK NHPDRVLPDR
QAVTMEKPFL NAYSRLLIRT CHRRAAFAMG GMAAFIPSKD PVKNDWVLNK IKTDKSLEAN
NGHDGSWVAH PGLADTARAE FDKVLGERSN QLDISRDTDA PITAEELLAR CEGERTEEGM
RHNIRVAVQY IEAWITGNGC VPIYGLMEDA ATAEISRTSI WQWIQHGKTL DNGDTVTADL
FRTMLLEEMK IIEEELGTER FDSGQFIQAA KLMEQLTTSD QLTDFLTLTG YDYL
|
|---|
| |