Gene VSAL_I2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2438 
SymbolaceA 
ID6987751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2610139 
End bp2611467 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content43% 
IMG OID643380708 
Productisocitrate lyase 
Protein accessionYP_002263792 
Protein GI209695862 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACAT TTAAACCGCA AACTCGCCAA CAGCAAATTG ATGCGTTAAA AAAAGATTGG 
GCTGAAAATC CTCGTTGGAA TGGGGTAACT CGTCCATACA CAGCGGAAGA AGTAATTAAC
CTTCGTGGAT CTTTTGCACC AGAGAATACG ATTGCTCAAA AAGGAGCCGA TAAGCTGTGG
GATCTCGTTA ATGGGTCGTC TAAAAAAGGG TATGTGAATT GCCTCGGTGC GTTAACTGGT
GGACAAGCGG TCCAACAAGC GAAAGCTGGG ATTGAAGCAA TTTATCTTTC TGGTTGGCAG
GTGGCAGCAG ATAATAATAC GGCATCAACG ATGTACCCTG ATCAATCGTT GTATCCAGTA
GATTCAGTAC CTTCGGTAGT TAAGCGTATT AATAATTCTT TTCGTCGAGC GGATCAAATT
CAGTGGTCAA CAGGCACAAC ACCAGAAGAA GGCATTGATT ATTTCCTTCC CATTGTTGCC
GATGCAGAAG CGGGTTTTGG AGGCATTCTA AATGGCTATG AATTGATGCG TAATATGATT
GAATCTGGTG CGGCAGGCGT TCACTTTGAA GATCAGTTAG CGTCGGTGAA AAAATGTGGT
CATATGGGGG GCAAAGTATT GGTTCCAACT CAAGAGGCGG TTCAAAAATT AGTGGCGGCT
CGATTGGCGG CTGATGTTGC AGGTACAACA ACGTTAGTTA TCGCAAGAAC CGATGCAAAT
GCCGCCGATT TGTTAACCTC AGATTGCGAT GCTTATGATC AAGAGTTTAT TGAAGGTGAA
CGTACTGCTG AAGGGTTCTA TAAAGTAACG GCAGGGATTG ATCAGGCAAT TTCTCGTGGT
CTTGCTTATT CTCCTTATGC TGATTTAGTG TGGTGTGAAA CAGCAACGCC ATGTTTAGAA
GAAGCGCGTA AATTTGCTGA AGCGATTCAT GCCGAATATC CAGACCAATT ATTAGCGTAT
AACTGTTCGC CATCGTTTAA CTGGGAGAAA AATCTTGATT CAGAAACGAT TGCGAAGTTC
CAACAAGAAC TGGCTGATAT GGGATACAAA TACCAATTCA TAACACTTGC TGGCATTCAT
AGCATGTGGT TCAACATGTT TGAATTAGCG CATTCTTATG CTCAGGGTGA AGGCATGCGT
CATTATGTTG AAATGGTTCA GCGTAAAGAA TTTGAATCTG CGTCTAAGGG CTATACGTTT
GTCGCGCATC AGCAAGAAGT AGGTACTGGG TACTTCGATA AGATGACAAA CACGATTCAA
GGCGGTAATT CATCAGTGAC CGCATTAACG GGCTCAACGG AAGAAGAGCA GTTTAAAACG
AATGCCTAA
 
Protein sequence
MTTFKPQTRQ QQIDALKKDW AENPRWNGVT RPYTAEEVIN LRGSFAPENT IAQKGADKLW 
DLVNGSSKKG YVNCLGALTG GQAVQQAKAG IEAIYLSGWQ VAADNNTAST MYPDQSLYPV
DSVPSVVKRI NNSFRRADQI QWSTGTTPEE GIDYFLPIVA DAEAGFGGIL NGYELMRNMI
ESGAAGVHFE DQLASVKKCG HMGGKVLVPT QEAVQKLVAA RLAADVAGTT TLVIARTDAN
AADLLTSDCD AYDQEFIEGE RTAEGFYKVT AGIDQAISRG LAYSPYADLV WCETATPCLE
EARKFAEAIH AEYPDQLLAY NCSPSFNWEK NLDSETIAKF QQELADMGYK YQFITLAGIH
SMWFNMFELA HSYAQGEGMR HYVEMVQRKE FESASKGYTF VAHQQEVGTG YFDKMTNTIQ
GGNSSVTALT GSTEEEQFKT NA