Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2423 |
Symbol | uppS |
ID | 6988314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2593958 |
End bp | 2594731 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380693 |
Product | undecaprenyl pyrophosphate synthetase |
Protein accession | YP_002263777 |
Protein GI | 209695847 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.674946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATC ACATTCACAC AGAAGCCTTA TCATTAGATA TATTGCCAAA ACACATTGCG GTAATTATGG ATGGTAATGG GCGCTGGGCA AAAGCTCAGG GTAAACCTCG TGTATTTGGT CATAAGGCTG GGGTTGATGC GGTAAGAAAA ACCATATCAG CGGCCAGTAA ATTAGGGATT AATGCCATTA CTCTGTTTGC TTTTAGCAGT GAGAATTGGC GTCGTCCAGA AGAAGAAGTG AGTGTTCTCA TGGAGTTGTT TATCACGGTA CTTTCCCGTG AAGTAAAACG TCTTCATAAA AATAATATTC AGTTGCGTGT TATAGGTAAT ACCTCTCAAT TTAGCTCTCG TCTTCAAAAG AAGATTTTAG AAGCAGAAGC ATTAACACTT GAAAATTCAG GTTTAGTGTT AAATATTGCG GCTAATTATG GTGGAAAATG GGATATTACC CAAGCAGTGC AACGTCTTGC TTATCAAGTT GAGCAAGGTA ATTTACAGGC AGATAATATT AACGAAGCAT TGATCGCTTC GAAACTGACG ATGTCAGATT TGCCTGATGT GGATTTGATG ATAAGAACCA GTGGTGAATG CCGGATCAGT AACTTTATGT TATGGCAGAT GGCTTATGCT GAGTTTTACT TCACTGACCA ATATTGGCCT GATTTTAATG AACAAAGTTT AGCGAATGCA GTTGCTTGGT TTGTTAGTCG AGAAAGACGA TTTGGTTGTA CCGGTGAGCA AATCCAAGCT CTTATGAACG AAAAGGATCG ATAA
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Protein sequence | MTNHIHTEAL SLDILPKHIA VIMDGNGRWA KAQGKPRVFG HKAGVDAVRK TISAASKLGI NAITLFAFSS ENWRRPEEEV SVLMELFITV LSREVKRLHK NNIQLRVIGN TSQFSSRLQK KILEAEALTL ENSGLVLNIA ANYGGKWDIT QAVQRLAYQV EQGNLQADNI NEALIASKLT MSDLPDVDLM IRTSGECRIS NFMLWQMAYA EFYFTDQYWP DFNEQSLANA VAWFVSRERR FGCTGEQIQA LMNEKDR
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