| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2414 |
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| Symbol | lpxB |
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| ID | 6989138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2583776 |
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| End bp | 2584927 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380684 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_002263768 |
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| Protein GI | 209695838 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAC CATTACGAAT CGGTATCGTT GCAGGAGAAC TCTCTGGTGA CACGCTAGGT
GAAGGCTTTA TTAAGTCGGT TAAAGCACAA TATCCTAATG CTGAGTTTGT AGGGATCGGT
GGACCTAAAA TGATAGCTCA AGGGTGTGAG TCATTATTTG ATATGGAAGA GCTGGCGGTA
ATGGGCTTGG TTGAGGTTCT TGGACGTTTA CCTCGTTTAT TAAAAGTTAA AGCTGAACTT
GTCCGTTATT TTTCTCAAAA TCCACCGGAT GTTTTTATTG GTATTGATGC GCCTGATTTT
AACTTACGTT TAGAGAAAAC GTTGAAAGAT TCGGGTATCA AAACCGTTCA TTATGTGAGC
CCTTCTGTTT GGGCTTGGCG TCCAAAGCGT ATTTTTAAAA TCGATGCAGC AACTGATTTA
GTTCTCGCCT TTTTACCGTT TGAAAAAGTA TTTTATGATA AATACAATGT GGCTTGTGAA
TTTATTGGTC ATACATTGGC AGATGCGATC CCAATGCAGA GTGATAAAAT AGCGGCTCGT
AAATTGTTGG GTCTAGAATT AGATCGCCAA TGGTTAGCGG TATTACCTGG GAGCCGTGGT
GGTGAAGTGG CATTAATCGC AAAACCGTTT ATAGAGACGT GTCAGAGAAT ACATCAAAAA
CACCCTAATA TGGGGTTTGT TGTGGCGGCC GTGAATGAAA AACGTCGTGA GCAATTTGAA
GTGATTTGGA AAGAAACGGC TCCTGAACTT AAATTTATTA TCATTCAAGA TACCGCTCGT
AATGTAATGA CTGCCGCAGA TTCTGTTTTA TTGGCTTCTG GTACAGTAGC ACTTGAATGT
ATGCTAATTA AAAGACCAAT GGTTGTTGGT TACCAAGTGA ATAAATTAAC CGGATGGATT
GCGCAAAAAC TCTCTATCAC CGAATTTGTT TCATTGCCTA ATGTGTTAGC AGGAAAGGAA
TTGGTTCAAG AGTTTATTCA AGAAGAGTGT CATCCTGATT TTCTATACCC TGCGATGGAA
AAAGTATTAA GCCAAGATAA CAGCGAATTG ATCGATAGAT TTACAGAGAT GCACCAGTGG
ATTAAAAAAG ATGCAGATAA ACAAGCTGCT AATGCCGTCT TACGTCTAAT TAATAAAGAA
ACAGCAGAAT AA
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| Protein sequence | MTKPLRIGIV AGELSGDTLG EGFIKSVKAQ YPNAEFVGIG GPKMIAQGCE SLFDMEELAV
MGLVEVLGRL PRLLKVKAEL VRYFSQNPPD VFIGIDAPDF NLRLEKTLKD SGIKTVHYVS
PSVWAWRPKR IFKIDAATDL VLAFLPFEKV FYDKYNVACE FIGHTLADAI PMQSDKIAAR
KLLGLELDRQ WLAVLPGSRG GEVALIAKPF IETCQRIHQK HPNMGFVVAA VNEKRREQFE
VIWKETAPEL KFIIIQDTAR NVMTAADSVL LASGTVALEC MLIKRPMVVG YQVNKLTGWI
AQKLSITEFV SLPNVLAGKE LVQEFIQEEC HPDFLYPAME KVLSQDNSEL IDRFTEMHQW
IKKDADKQAA NAVLRLINKE TAE
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