Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2402 |
Symbol | mltD |
ID | 6987739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2570958 |
End bp | 2572511 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380673 |
Product | membrane-bound lytic murein transglycosylase D precursor |
Protein accession | YP_002263757 |
Protein GI | 209695827 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTTA AGCTCCATTG GATTGGATTA GCGTTATTGG CAGGCTGTCA AAGTGCTCCA CCATCAGAAA AAACACAGCC TGATACGACT TCTGCTATCT CTACGCCTTC AAAGCAAGAT ACCAAACCAG CAGAAATTAA ATCAATCGAA AAACCGGAGC TTACCCCTCA AGAACAAGAA GACGTATGGC AACGTATTGC AATGCAATTA AATATGCCAA TTCCAGATCA TAAATCGGTC GATTATTATC GTAATTGGTA CATTAAACAC CCAAGTCACC TGCGTACTGT TGCCAAACGA GCTCAACCGT TTCTGTATAT GATCACTGTT GAAATTGAAA AACGCGGACT TCCTATGGAG TTAGTTCTTC TTCCTATCGT TGAAAGTGCG TTTGACCCTT TTGCTTACTC CCACGGCAGT GCCGCTGGTC TATGGCAATT TGTCCCAGGA ACGGCTGATC GCTTTAAATT AGAACGTAAT TGGTGGTATG ACGGTCGTCG TGATGTACCT GCGGCAACGA ATGCAGCATT AGATTACATG GAATATTTTG ACCGTCGCTT TGATGGCAAT TGGCAACAAG CGATTGCATC TTACAACAGT GGTGGTGGAC GAGTATCTAG AGCAATCCGA AAAAATAAAA ACTTAGGTAA ACCTACCGAT TTCTTTTCAT TAGATTTACC AGAAGAAACC AGCGGTTATG TCCCTAAATT ATTAGCATTA GCTGACATCA TTAAAAACCA TGAAAAATAC GGGGTAGAAT TGCCACCTAT TGCCAACAAA CCTGTACTCG AAATGGTAGA CCCAAATAAA CAATTAGATT TGGCGATTGC GGCAGAATTT GCGGGTATTT CAATCTCTGA ATTGCAAGGC TATAACCCTG GATACAATCA ATGGGCAACG TCACCAGATG GCCCTTATCA TCTATTATTA CCGATTGATA AAGTCGATCG TTTTAATGCC AATCTGAAAA AGAATGGCAA TAAAACAATG AAAGTTGTGC GCTACAAAGT TCAATCCGGC GATACAATCA GTCAATTAGC AGTGAAGCAT AATACGACCT CTAGCATCAT TGAACAAACC AATGACTTAA ATGGTACGAG CATTCGAGTT GATCAATATT TATTAATTCC AACGGCTTCT CAAGGCAATA AAACCTATGC ATTAAGTGCA CCACAGCGCT TAAAGAAAAC TCAAGCCAAA GCAAAAGGAA AATACAAATC TGACCATACC GTTAAAGATG GAGAATCGTT ATGGAGCATC GCTCGTGATA ACAGCATCTC TTATCGTGAT TTAGCAAAAT GGAACGGCAT GGCACCAAAA GATTCATTGC GTGTTGGACA AAAATTAGTC ATTTGGAAAA GCAATTCTGA TGGTGGGATA ATCCGTACGG TTCATTACCA AATCCGTCAA GGCGATAACC TTAGCTCTAT TGCACAAAAA TTCAGTGTCT CTGTGACAGA CATCATGAAA TGGAATAGCA TCGAACGTGG CTCTTATATT AAGCCGGGAC AAAAATTAAA ACTTTACTTT GATGTTACTA AGGCAAATGT ATGA
|
Protein sequence | MKLKLHWIGL ALLAGCQSAP PSEKTQPDTT SAISTPSKQD TKPAEIKSIE KPELTPQEQE DVWQRIAMQL NMPIPDHKSV DYYRNWYIKH PSHLRTVAKR AQPFLYMITV EIEKRGLPME LVLLPIVESA FDPFAYSHGS AAGLWQFVPG TADRFKLERN WWYDGRRDVP AATNAALDYM EYFDRRFDGN WQQAIASYNS GGGRVSRAIR KNKNLGKPTD FFSLDLPEET SGYVPKLLAL ADIIKNHEKY GVELPPIANK PVLEMVDPNK QLDLAIAAEF AGISISELQG YNPGYNQWAT SPDGPYHLLL PIDKVDRFNA NLKKNGNKTM KVVRYKVQSG DTISQLAVKH NTTSSIIEQT NDLNGTSIRV DQYLLIPTAS QGNKTYALSA PQRLKKTQAK AKGKYKSDHT VKDGESLWSI ARDNSISYRD LAKWNGMAPK DSLRVGQKLV IWKSNSDGGI IRTVHYQIRQ GDNLSSIAQK FSVSVTDIMK WNSIERGSYI KPGQKLKLYF DVTKANV
|
| |