Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2401 |
Symbol | |
ID | 6987738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2570113 |
End bp | 2570871 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380672 |
Product | putative metallo-beta-lactamase |
Protein accession | YP_002263756 |
Protein GI | 209695826 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTATTAA TAAAAAGCAT ACCTGCATTT AATGATAATT ACATTTGGTT AATTCACAAC AATGATAATC ATTGTGTTGT GGTTGATCCA GGAGAAGCAG CCCCAGTGCT TGCCTGCCTT AAAGAGCATG GTCTTATTTT AGATGCAATT TTAATTACGC ACCACCACCA TGATCATATT GGTGGGGTTC CTGAACTTGT TCGTCAATTT CCAAACATCA ATGTTGTAGG CCCTGAAAAT GAACCTATTC CAACCCTCAC TCATCCCGTT GGTGATGGTG ATTTTGTTGA ATTATTCAAT GAAAAATTCA TGGTGCTAGG CGTTGAAGGA CACACAAAAG GTCATATCGC TTACATTGGT GATGAAAAAC TATTTTGTGG TGATACCCTT TTCTCAGCCG GTTGTGGTCG CTTATTTGAA GGCACCGCAG AACAAATGTT TCATTCACTG CAAAAATTGG CCGCATTACC CGATGAAACA GAAGTGTATT GCGCCCATGA ATACACTGCG TCCAATCTTG CTTTTGCGTT GGCGGTTGAA CCTGATAACG ATTATTTACA ACAATATCGT GAAAAAGTTT TACGACTTCG AGCAAATGGA AAAGCAACGA TCCCAACAAC GATGCAACGA GAAAAGCTCA TTAATCCTTT TTTAAGAACC AGTGAAGCAA GTGTAAAACA AGCCGTTTCG TCCAAAGTAG AAAATGATTC CGAAGTTGCA ACCTTTGCCG CATTAAGGAG ATGGAAAGAC GAGTTTTAA
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Protein sequence | MLLIKSIPAF NDNYIWLIHN NDNHCVVVDP GEAAPVLACL KEHGLILDAI LITHHHHDHI GGVPELVRQF PNINVVGPEN EPIPTLTHPV GDGDFVELFN EKFMVLGVEG HTKGHIAYIG DEKLFCGDTL FSAGCGRLFE GTAEQMFHSL QKLAALPDET EVYCAHEYTA SNLAFALAVE PDNDYLQQYR EKVLRLRANG KATIPTTMQR EKLINPFLRT SEASVKQAVS SKVENDSEVA TFAALRRWKD EF
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