Gene VSAL_I2389 details

Gene Information

• Locus tag: VSAL_I2389
• Symbol: upp
• ID: 6989055
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 2558416
• End bp: 2559042
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643380660
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_002263744
• Protein GI: 209695814
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTTG TTGAAGTAAA ACATCCGCTA ATAAAACATA AAATTGGTTT AATGCGCGAA 
GGCGATATCA GCACTAAGCG TTTTCGTGAA TTAGCAACTG AAGTAGGTAG CTTACTTACT 
TATGAAGCAA CATCAGACTT TGAGACAGAA AAAGTAACTA TCAATGGCTG GAACGGCCCT 
GTTGAAGTTG ACCAAATTAA AGGTAAAAAA GTAACGGTAG TGCCAATCTT ACGTGCAGGT 
CTTGGCATGA TGGATGGCGT TCTTGAGCAC ATCCCAAGTG CGCGTATCAG TGTTGTTGGT 
ATTTACCGTG ACGAAGAAAC GTTAGAGCCT GTACCTTACT TTAACAAGTT AGCGTCTAAC 
ATCGATGAGC GTATTGCTTT AGTTGTTGAT CCAATGCTAG CGACTGGCGG TTCTATGATC 
GCAACGCTTG ATCTTTTAAA AGAGAAAGGC TGTAAGAACT TTAAAATTCT TGTTCTTGTT 
GCTGCTCCTG AAGGCATTGC TGCATTAGAA AAAGCGCATC CAGATGTTGA GCTTTATACT 
GCGGCTATCG ATGAGAAGTT GAATGATAAA GGTTACATCA TTCCAGGTCT TGGTGATGCT 
GGTGATAAGA TCTTCGGTAC TAAGTAA 

 

Protein sequence

MKVVEVKHPL IKHKIGLMRE GDISTKRFRE LATEVGSLLT YEATSDFETE KVTINGWNGP 
VEVDQIKGKK VTVVPILRAG LGMMDGVLEH IPSARISVVG IYRDEETLEP VPYFNKLASN 
IDERIALVVD PMLATGGSMI ATLDLLKEKG CKNFKILVLV AAPEGIAALE KAHPDVELYT 
AAIDEKLNDK GYIIPGLGDA GDKIFGTK