| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2359 |
|---|
| Symbol | crr |
|---|
| ID | 6989030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 2534422 |
|---|
| End bp | 2534931 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643380631 |
|---|
| Product | PTS system glucose-specific transporter subunit |
|---|
| Protein accession | YP_002263715 |
|---|
| Protein GI | 209695785 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2190] Phosphotransferase system IIA components |
|---|
| TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000207405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTGT TTGACAAAAT TAAAAGCGCA TTTTCTTCTG AAAGTGCTGC CGCTGGTGCA
ATTGAAATCA TCGCACCTCT TTCTGGTGAA ATCGTAAACA TCGAAGATGT GCCAGATGTA
GTGTTCGCTG AAAAAATCGT TGGTGACGGT ATTGCTATCA AACCTTCTGG CAATAAAATG
GTTGCTCCAG TAAACGGTAC GATCGGTAAA ATCTTCGAAA CTAACCACGC TTTCTCAATC
GAATCTGAAG ACGGCATTGA GCTTTTCGTT CATTTCGGTA TTGATACTGT TGAACTTAAA
GGCCAAGGCT TCACTCGTAT TGCTGAAGAA GGTCAAGAAG TTAAAGCTGG CGATATCGTA
ATCGAATTTG ATCTTGCGTA TCTTGAAGAG CACGCGAAAT CAACGCTTAC TCCTGTTGTT
ATTTCTAACA TGGACGAAAT CAAAGAGCTA ACTAAGCTTT CTGGTGCTGT TACTGTTGGT
GAATCTCCAG TTCTTAAAGT AACTAAGTAA
|
|---|
| Protein sequence | MGLFDKIKSA FSSESAAAGA IEIIAPLSGE IVNIEDVPDV VFAEKIVGDG IAIKPSGNKM
VAPVNGTIGK IFETNHAFSI ESEDGIELFV HFGIDTVELK GQGFTRIAEE GQEVKAGDIV
IEFDLAYLEE HAKSTLTPVV ISNMDEIKEL TKLSGAVTVG ESPVLKVTK
|
|---|
| |