Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2347 |
Symbol | |
ID | 6987708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2520393 |
End bp | 2521541 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643380620 |
Product | hypothetical protein |
Protein accession | YP_002263704 |
Protein GI | 209695774 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCACAT CAATAAAATT GATGACACTA TTAACTCTCT GCTTAATGGT GTCTTTTTCT TCCAATGCCA TTTCAATAAT GGAATCTGAC TCTTGGAAAA AAGACTACCA CCAAGCAAGA ATTCAAGATC CTAATATCGC TTTAATCATG CTAGAAGACG TTTATAATGG CCTTGAACCT AGCGCTGAAC GGGTTTATGT CGCCCTTCGC ATGCATGGTT TCATAACACG CAGAGGCGGT GAATACCCTT TACCATCCCC CACATCTAAT CCTTACTCTC AAGTTGAATA TTCTATTGTT AAAGCAATGA ATCTTGAAGA CCAAGCCCAA GTATCAAATG CTTTTTTTCT TACCTCTCAG AGCTACCAAC AAGCCGATAA GCTTGATGAC TCTGACCTAG ATGCAATTTT TAATATACAA CTGTGTAAAT ATAATCTTAT GTTAGGTCAA CTTTATCTCG GCGAATTTTA TTGTCAGAGC GCCATACAAA ATATAAAAAC ATCAACCAAT CATTATATTG ACCTTAAATG GCCCTATCGA TTGCTTGCGC TTGCCTACCA AGAAATGAAT AATTTCACTA AAGCATTAAA AGCCAGTGAA GAAGTGATAA AGCTAAGTCA ACCCTATGAC ATTAATGACA CTACCTTTAA TAACATAGGA AACTTACTCA TCTCTATGGG TAAATTAAAT TCAGGTGAAT TGTATTTATT AAAATCATTA GAGATTAGAA AGAGCAGGAA TATTGCTCAA AAAGTAGCGC AAACAGAAAC GGATTTAGAT GAATTATATT TAAAAAAAGG ACAATTAGAT AAAGCAAAAT TATTTTCTCT GCGGGCTATT GAGAACTTTA ATAGTGGGAT TTTCAAAATA GGCTTAGGTT CTGCTTACTT AGTACATGGA AAAATATTAA CCGCAGAAGT TTTTTTTGAT GAAGGTATTG AATACCTTTA TTTAGCCTTA TCGACGCTTA AAGATAAAAA AAATTCCAAA TTAATCATCA ATACATATCA GTCATTGAGT CGTATTTATT TAGAATACCA ACACCCCAAC AAAGCATTAG AACTGATCAA TTTAGCGATT AATAAAGCAA AAAAACAGAA AGTAAAAATT TACTCGTCTC ATCCTATTTG CATCAAGCAA AGGTATTAA
|
Protein sequence | MSTSIKLMTL LTLCLMVSFS SNAISIMESD SWKKDYHQAR IQDPNIALIM LEDVYNGLEP SAERVYVALR MHGFITRRGG EYPLPSPTSN PYSQVEYSIV KAMNLEDQAQ VSNAFFLTSQ SYQQADKLDD SDLDAIFNIQ LCKYNLMLGQ LYLGEFYCQS AIQNIKTSTN HYIDLKWPYR LLALAYQEMN NFTKALKASE EVIKLSQPYD INDTTFNNIG NLLISMGKLN SGELYLLKSL EIRKSRNIAQ KVAQTETDLD ELYLKKGQLD KAKLFSLRAI ENFNSGIFKI GLGSAYLVHG KILTAEVFFD EGIEYLYLAL STLKDKKNSK LIINTYQSLS RIYLEYQHPN KALELINLAI NKAKKQKVKI YSSHPICIKQ RY
|
| |