| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2342 |
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| Symbol | flgM |
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| ID | 6988516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2516525 |
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| End bp | 2516836 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643380615 |
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| Product | negative regulator of flagellin synthesis FlgM, anti-sigma28 factor |
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| Protein accession | YP_002263699 |
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| Protein GI | 209695769 |
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| COG category | [K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.449707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAGTA TTGACCAATT ACGTGCTAGC CAGGCAATGT CAACGCTACG CAGCCAAGCT
CGTGTTGACT CTGGTGATAA AGCACCAGCA AGTGCAGCAC CGGCAATGTC AGCAAAAGCA
GATGCGGTTT CTTTAAGCCA TCAAGGTAAA GAAATTGGCC AAATGCATCA ACAGTTAGCG
ACAGAACCTT CTTTTAACGC AGACAAAGTA GCGGCAATAA AAGCAGCTAT CGCAAATGGA
TCGTATTCTG TTGATCCAGA ACGCCTAGCT GACAATATTA TCAAATTTGA AGATGAACTG
GCTGGCCTAT AA
|
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| Protein sequence | MTSIDQLRAS QAMSTLRSQA RVDSGDKAPA SAAPAMSAKA DAVSLSHQGK EIGQMHQQLA
TEPSFNADKV AAIKAAIANG SYSVDPERLA DNIIKFEDEL AGL
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