Gene VSAL_I2329 details

Gene Information

• Locus tag: VSAL_I2329
• Symbol: flgK
• ID: 6988526
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 2503457
• End bp: 2505337
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643380602
• Product: flagellar hook-associated protein FlgK
• Protein accession: YP_002263686
• Protein GI: 209695756
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGACTTG ATCTGCTTAA TCTAGGTACA CAAGGTGTGC TTACGGCGCA GCGTCAACTG 
AATACGACCA GTCACAATAT TAACAACGTT AATACTGAAG GCTTTAGTCG TCAATCGGTA 
GTTCAAGAAA CAAATATGCC TCATTGGGTG TCAGGTGCAA ACCTCGGCGC AGGCGTGCAT 
GTTGCCGCTG TGCGACGTTC GTTTGATCAG TTCGCAACCA ATGAACTGAA CCTATCGACA 
ACCAATCTAA ATTACTCGAT GGATACAGAA GCAAATCTTG ATGTTCTTAC GAATATGATG 
TCGTCTATTG GCGCTAAACG TATTCCTGAA AACATTAATG ATTGGTTTGA TGCCGTAAAA 
ACGCTTTCTG ATAGCCCTAA CGAAATCGGC GCACGTAAAG TCGTCCTTGA AAAATCACGT 
CTTATTTCAC AAAGCTTGAA CGACTTTTAT GAAAATGTAC GTCAGCAAAA TGCCGACGTA 
AATAAAAAGA TGGATCTTAC TGTAGAGCGT ATGAATGGTA TTGCTCTAGA GTTAAAAGAC 
ATTAACAAGA TGATGGTTAA GACCCCTGGT CCGCACAATG ACCTAATGGA CCGTCATGAA 
AAGTTAATTA AAGAGCTGTC TCAATACACA AAAGTAACGA TCACAAAACG TGACAATGAG 
AATTCATTCA ATGTCTTAAT TGGTGGTGGG CACATGTTAG TGTCTGGTAC TGAATCAAGT 
CAATTGAAGA TGATTCAAGG AACGCCTGAC CCATTACAGC GTCGACTAGC GATGGTTGAA 
GGCAATGGTG TTAAAGCCAT TCAGCATGAC AGCATTGGCG GTAAATTATC GTCATTGTTT 
GAGCTGCGCG ATAAAACGAT CCCTACGATT ATGGATGAAC TAGGCCGAGT AGCCGTAGGC 
TTCAGCAGTG AAGTTAACCG TTTACAAAGT CAAGCCATTG ATTTACGTGG GCAGGTCGGT 
GCAAATATTT TCTCTGACGT AAACTCAGAA CAAGCCGTTC GTAGTCGTGC CATTATTCCT 
GGTGATTCTT CAGCAGAAAT CGGTGTATTT ATTGACGACA TCAGCTTATT GAAAGCCGGT 
GATTACGCCC TTAAATACGA TGGCAGCCAA TATACGGTGA CCCGACCTAC AGGCGAAGTA 
CAACGCTTAG ATCCAACCGG TAACCCATCG ACCTTTTTCT TAGATGGCAT GCGAGTAGAA 
ATTCGCGAAC CACTAAGTGC CGGTGAGCGT ATATTACTTC GTCCAACCCG TCTTGCGGCT 
GGCGACATGA AGCTTGAAAT GAACGAAGCT GAGAAAATTG CGGCACAAAG TTATGCGAGC 
TCTGCAACGT TTGCGACAGG TAATGCGAAA TTTAAAGTAT TACAGTCAGG CGACTTAAAA 
GAGTTCCAAG TTGTGATTTC TCCAGCAGCG AATCAATTTG CTGTGTTAGA CATGAAAGGC 
AAAATGTTAC TTGAGCCACA AACCTATCCG CCAAAAGGTC CAGTGACTGT CGGTGGAACT 
ACGTTTGAAT TGTCTGGTGG TGCTGCCGCA AATGATAAGT TTGCAGCAAA CCTCGTTCCA 
TCAGAGGGGG ATAACGGTAA CTTGTTGCTA ATGCAAGGTC TGCAAACTCG TAAGGTCATG 
GACGAAGGCC GTTCAACGGT GATCGACTTA TACCAAAACG TAAATACAGA AGTTGGCCTT 
AAAAAAGCAA CCGCCACTCG TTTAACCGAA GTTGCACGTG TAGAGACCGA AGCTGCACAA 
AGTCGCGTTG CGTCTGTTTC TGGTGTTAAC TTGGATGAAG AAGCGGCAAA CATGATGAAG 
TTTCAACAAG CTTACATGGC GTCTTCTCGC ATAATGAAAG CGGCAGATGA AACGTTTAAT 
ACAATTCTGC AATTATCGTA A 

 

Protein sequence

MGLDLLNLGT QGVLTAQRQL NTTSHNINNV NTEGFSRQSV VQETNMPHWV SGANLGAGVH 
VAAVRRSFDQ FATNELNLST TNLNYSMDTE ANLDVLTNMM SSIGAKRIPE NINDWFDAVK 
TLSDSPNEIG ARKVVLEKSR LISQSLNDFY ENVRQQNADV NKKMDLTVER MNGIALELKD 
INKMMVKTPG PHNDLMDRHE KLIKELSQYT KVTITKRDNE NSFNVLIGGG HMLVSGTESS 
QLKMIQGTPD PLQRRLAMVE GNGVKAIQHD SIGGKLSSLF ELRDKTIPTI MDELGRVAVG 
FSSEVNRLQS QAIDLRGQVG ANIFSDVNSE QAVRSRAIIP GDSSAEIGVF IDDISLLKAG 
DYALKYDGSQ YTVTRPTGEV QRLDPTGNPS TFFLDGMRVE IREPLSAGER ILLRPTRLAA 
GDMKLEMNEA EKIAAQSYAS SATFATGNAK FKVLQSGDLK EFQVVISPAA NQFAVLDMKG 
KMLLEPQTYP PKGPVTVGGT TFELSGGAAA NDKFAANLVP SEGDNGNLLL MQGLQTRKVM 
DEGRSTVIDL YQNVNTEVGL KKATATRLTE VARVETEAAQ SRVASVSGVN LDEEAANMMK 
FQQAYMASSR IMKAADETFN TILQLS