| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2319 |
|---|
| Symbol | flaC |
|---|
| ID | 6988505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2492863 |
|---|
| End bp | 2494071 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643380595 |
|---|
| Product | flagellin |
|---|
| Protein accession | YP_002263679 |
|---|
| Protein GI | 209695749 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTAGCAC CGAATAATGA AGCTCAGTTT TCCGAACTCC GGAAAACAAT CGGAAAACTA
AACGGAGATA CCACTATGTC GATTACAGTA AATACGAACG TATCAGCGAT GACGGCTCAG
CGTTACTTGA ACAATGCAAC AGATGGCGTA AATAAATCAA TGGAACGCTT ATCTTCTGGC
TATAAAATTA ACAGCGCGAA AGACGATGCG GCTGGTTTGC AAATTTCAAA CCGCTTAACG
TCACAATCTC GTGGCTTAGA TGTTGCTGTT CGTAATGCTA ACGATGGTAT TTCTATTGCA
CAAACCGCAG AAGGGGCGAT GAATGAGTCA ACCAACATTC TGCAACGTAT GCGTGATTTA
TCGCTTCAAT CTTCAAATGG ATCAAATACC ACGTCTGATC GTGAAGCGAT TCAGCAAGAA
GTGGGTGCAT TGAATGATGA ACTAAACCGA ATTGCAGAAA CAACGTCATT TGGTGGCTCA
CGTCTTCTTA ATGGTCAGTT TGGTACTAAG TCTTTCCAAA TCGGTGCTGA TTCTGGTGAA
GCCGTCATGC TGAATTTAAG TAACATGCGT TCAGATTCTG CATCAATGGG TGGCACAAGC
TATAAGGCAG AAACAGAGCT TGGTGCTGGT TGGGCAGTTA ATGCTGAAAA TTCAGAATTA
AAAGTCTCGT TTTTAAATAA AGCAGGCGAA GAGAAAGAGC TAACTATTAA TGCGAAAGCT
GGCGATGACA TTGAGCAAGT TGCGACTTAC ATTAATGGTC AAACGGATTC TATTAATGCC
TCTGTCTCAG AAAAGGGTGA GCTTCAGATT GTGACCTCTA ATGATAAAGT GAAAGGTGAA
GTAAGCTTCG GTGGTTCTCT TGCTGGCGAA CTAAAAATGG GCGCAGCTCA AGCTGAAACC
GTAAAAAGTA TTGATGTAAC GACAGTGGGG GGCTCTCAGA AGTCAGTGGC GATACTGGAT
GCGGCAATGC AGTTTGTTGA TTCTAATCGT GCCGATTTAG GGGCATTCCA AAACCGCTTT
AGTCACGCGA TTTCTAACTT AGATAGTATT AATGAAAACG TATCTGCGTC TAATAGCCGT
ATTAAAGATG TCGATTTTGC AAAAGAAACG ACAGAGATGA CAAAAGCTCA AATTCTTCAA
CAAGCAAGTT CGTCTATTTT AGCTCAAGCT AAGCAAGCGC CAAACGCAGC TCTTGGTCTA
TTAAGATAG
|
|---|
| Protein sequence | MVAPNNEAQF SELRKTIGKL NGDTTMSITV NTNVSAMTAQ RYLNNATDGV NKSMERLSSG
YKINSAKDDA AGLQISNRLT SQSRGLDVAV RNANDGISIA QTAEGAMNES TNILQRMRDL
SLQSSNGSNT TSDREAIQQE VGALNDELNR IAETTSFGGS RLLNGQFGTK SFQIGADSGE
AVMLNLSNMR SDSASMGGTS YKAETELGAG WAVNAENSEL KVSFLNKAGE EKELTINAKA
GDDIEQVATY INGQTDSINA SVSEKGELQI VTSNDKVKGE VSFGGSLAGE LKMGAAQAET
VKSIDVTTVG GSQKSVAILD AAMQFVDSNR ADLGAFQNRF SHAISNLDSI NENVSASNSR
IKDVDFAKET TEMTKAQILQ QASSSILAQA KQAPNAALGL LR
|
|---|
| |