Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2318 |
Symbol | flaD |
ID | 6988506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2491276 |
End bp | 2492403 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643380594 |
Product | flagellin |
Protein accession | YP_002263678 |
Protein GI | 209695748 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATAA ATGTAAACAC AAACGTATCA GCAATGACGG CACAGCGTTA CTTAAACAAC GCAACTAACG ACCTAAACAG CTCAATGGAG CGTTTGTCTT CAGGTCTTAA AATTAACAGT GCAAAAGATG ATGCGGCTGG CCTACAAATT TCAAATCGTC TAACTTCTCA AACTCGCGGC TTAGATGTTG CAGTTCGAAA TGCAAACGAT GGTATCTCAA TGGCGCAAAC TGCTGAAGGC GCGATGAACG AAACAACGAA CATCCTTCAA CGTATGCGCG ATTTATCACT TCAATCTTCA AACGGTTCAA ATACATCAGC TGACCGTGGC GCAATTCAAG AAGAAGTGGT TGCTTTGAAT GACGAGTTAA ACCGTATTGC AGAAACAACG TCATTTGGTG GTTCTCGCCT ACTGAATGGT CAATTTGGTA CTAAGTCTTT CCAAATCGGT TCAGATTCAG GTGAAGCAGT AATGCTAACA CTGAATAACA TGCGCTCTGA TACGACAGAT ATGGGTGGTT CAACTTACTC AGCGACTGAA GGCAAAGATT CAAGCTGGAA AGTAGGCGCT GAGAACTCAG AATTAACAAT GAATTTTGTT GATAAAGACG GCAAAGAGCA AAACATCTCA ATCAATGCGA AAACTGGCGA CGACATTGAA GAAGTAGCGA CTTACATCAA TGGTCAAAGT AACGCGATAA ACGCATCTGT TACCGGTGAA GGCAAACTGC AAGTATTTGC ATCTGCTGAC GCGAGTGATA TTAAATTTGG TGGTTCACTA AGCAGTGAAT TAGGTATGGG TAACAAGGTT GCCGATACAG TAAAAAGCAT CGATGTCACA ACCGTAGGTG GCTCACAAAA AGCCGTTGCG ATTCTTGATT CAGCAATGCA ATACGTTGAT TCAAACCGTG CAGACCTTGG TGCTTTCCAA AACCGCTTTG GCCACGCTAT CAGCAACTTA GAAAATATTA ATGAGAACGT TAATGCGTCT AACAGCCAAA TCAAAGATGT TGATTTTGCT AAAGAAACGA CAGCAATGAC GAAAGCTCAA ATCCTGCAAC AAGCGAGCTC TTCAATTCTA GCTCAAGCTA AGCAGGCACC AAATGCAGCA TTAGGCCTGT TGGGCTAA
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Protein sequence | MAINVNTNVS AMTAQRYLNN ATNDLNSSME RLSSGLKINS AKDDAAGLQI SNRLTSQTRG LDVAVRNAND GISMAQTAEG AMNETTNILQ RMRDLSLQSS NGSNTSADRG AIQEEVVALN DELNRIAETT SFGGSRLLNG QFGTKSFQIG SDSGEAVMLT LNNMRSDTTD MGGSTYSATE GKDSSWKVGA ENSELTMNFV DKDGKEQNIS INAKTGDDIE EVATYINGQS NAINASVTGE GKLQVFASAD ASDIKFGGSL SSELGMGNKV ADTVKSIDVT TVGGSQKAVA ILDSAMQYVD SNRADLGAFQ NRFGHAISNL ENINENVNAS NSQIKDVDFA KETTAMTKAQ ILQQASSSIL AQAKQAPNAA LGLLG
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