| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2317 |
|---|
| Symbol | flaE |
|---|
| ID | 6988508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2489892 |
|---|
| End bp | 2491028 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643380593 |
|---|
| Product | flagellin |
|---|
| Protein accession | YP_002263677 |
|---|
| Protein GI | 209695747 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTA CAGTAAATAC TAACGTATCA GCAATGACAG CACAGCGTTA CTTAAACAGC
GCAACATCTG ACGTTAACCA ATCAATGGAA CGTCTGTCTT CTGGTAGCAA AATCAACAGT
GCTAAAGATG ATGCTGCTGG CCTACAAATC TCTAACCGTC TAAACACGCA AACTCGTGGT
CTAGACGTAG CGGTTCGTAA CGCAAACGAC GGCATCTCTA TGATGCAAAC TGCTGAAGGC
GCAATGAAAG AGACTTCAAA CATTCTTTCT CGTGTACGTG ACCTTGCACT GCAATCTTCA
AATGGTTCAA ACACTGACGC TGACCGTGGC GCGATCCAAC AAGAAGTAAC GGCTCTTTCT
GATGAAATGA ACCGTATTGC TGAAACAACT TCTTTTGGTG GTACTCGTCT ACTTAACGGT
AACTTCGGTA CTAAATCTTT CCAAGTTGGT GCTGATTCTG GTGAAGCAGT AATGCTTACT
TTGAACAACC TACGTGCAGA CGAAGCTAAC ATGGGTGGCC AATCTTTCAC TGCGAAAGAA
GGTGTTGCTG CTGGTTGGAC TGCTGGTAAA GACGCAAACA TGACTATTTC TTTCACAGAC
AAATCTGGCG AAGATCAATC TGTTTCTATC AACGCTAAAG CTGGCGACGA TATCGAAGAA
GTAGCAACTT ACATCAACGG CCAAACTGAC AAAGTTAGCG CTTCTGTTGG TGAAGATGGC
AAGCTACAAG TATTCGCAGC TAAAGGCACA ATCGAAGGCG AAATCGCATT CTCTGGTGCT
CTAGCGAACG AAACTGGTAT GTCTGACGCT GTTCAAGCTC AAAAAACAGT GGGTAACATT
GATGTTACGA CTGTAGCTGG TTCTCAAGAC GCAGTAGCGG TTGTTGATGC AGCAATGAAA
TTTGTTGATA GCCACCGTTC TGAGCTAGGT GCTGCTCAAA ACCGTATGGG TCACACAATC
AACAACTTAG ACAACATTAA CGAAAACGTT TCTTCTGCTA AGAGCCAAAT CAAAGACGTT
GATTTCGCGA AAGAAACAAC TGAAATGACT AAAGCACAAA TCCTACAGCA AGCAAGCTCT
TCTATCTTAG CTCAAGCTAA GCAAGCGCCA AATGCTGCTC TAGGTCTATT ACGTTAA
|
|---|
| Protein sequence | MSITVNTNVS AMTAQRYLNS ATSDVNQSME RLSSGSKINS AKDDAAGLQI SNRLNTQTRG
LDVAVRNAND GISMMQTAEG AMKETSNILS RVRDLALQSS NGSNTDADRG AIQQEVTALS
DEMNRIAETT SFGGTRLLNG NFGTKSFQVG ADSGEAVMLT LNNLRADEAN MGGQSFTAKE
GVAAGWTAGK DANMTISFTD KSGEDQSVSI NAKAGDDIEE VATYINGQTD KVSASVGEDG
KLQVFAAKGT IEGEIAFSGA LANETGMSDA VQAQKTVGNI DVTTVAGSQD AVAVVDAAMK
FVDSHRSELG AAQNRMGHTI NNLDNINENV SSAKSQIKDV DFAKETTEMT KAQILQQASS
SILAQAKQAP NAALGLLR
|
|---|
| |