| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2315 |
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| Symbol | fliD |
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| ID | 6988509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2487381 |
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| End bp | 2489321 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380592 |
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| Product | flagellar capping protein |
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| Protein accession | YP_002263676 |
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| Protein GI | 209695746 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATGA GCCCGATGGG GATGGGTGGT GGCCTAGATA TTAATTCTAT GGTGAGCAAA
ATAGTTGAAA GCGAGCGCTT ACCAAAGCAG CAGCGCATCG ACCGTGAGCG TTCAGACATA
GACATGAATA TCAGTGGTTA TGGTCGTCTG CAAGAATCGT TAGATACTAT GAAAACTCTG
ATGGCGACTT TTCGTCAAGA GGATACGTTT GCCTCGAGAA GTGTGAATAC CAGTAATGAA
GATGCCGTTC ATGCCACTGC ATCACCAGAT GCGCTTGCCG GTAAATACTC GATTGATGTA
TTGCAATTGG CACAAGCACA AAAGTTAGCA TCGTCCCCAG TAAAAGAGGA CGCAAGATTT
GGCCCTGGTG AATTAACGAT TCATCTTGGT GAAAAAGAGT TCTCACTGAC GGTCGTTGGT
GATCAGAATA AAATCACCGA CATTGTACGA CAAATTAACA GCGCGCCTGG TAATCCGGGA
GTGCAGTCTT CTATAGTTAA AGACGATGGC GGATCTCGTC TGATTCTTGC CTCTGACAAA
CCAGGGGAAA GCAATGAAAT CAAAATCGAT GTAAAAGCTA AATATAATAA TACATTGCAT
CGTTTTGGAT TTAATCCTGA TTTTGATCCT TCAGTGTCGA CTGAATACGA TATTCCGACG
TTATTAGCGC AACAATCTCC TCAAGCGCCA GTTCAAATAA CAAAAGAAGA AGTGAAAGAT
CTGTCAGATG AAGAGAAATT TGCTTATTTC AAACCACTTA TTGATAACGC AAAACGTGAG
ACGGCTGAAC TTGATCAAGC GGCAAAAGAA ATCGTTCAGC AGCAAGAAGC GACAGCGGCA
TTGTCTACGT TAGAAGACCC AACGGATCCT ACCTCTGGCA TGTCTGGTTG GAGTGAAAGA
ACAGCAGGTA CATTACAAGC CGCATTACCA AGTGCTGATG AAAAAATTGA ATTAGCAAAA
GCGGCAAAGC AAGGCGATCA ATCAGCCGCT GAAGCCCTTG CCGAAATTGG ACAAACACCT
GACACCGTAT TTAATGCCGC AGGCATTACT TATGAACCAT CTCAACCTGC GCCAAAGAAA
GACGTCGTTG AGATAGCAAA AGAAAAAATT GAACAAGTTC CTACTGCACT TAAAGAAATA
GCGAAGAAAA AGCTAGAGCC CATTGAAGAT TTAGTGGATC AAATGAAGCC AAGAAAGCCC
CTTTATTCAG GGCTTCAAGA AGTGCAATCG GCAACCAGTG CTAAAGTGGT ATTAGATGGT
GTAGCTCGAA TTAGTAGTGA CACCAATGTT ATTCAAGATG CAATTCAAGG CATTGATTTA
ACATTAAAGA ATACAACCAC AAAAGACGGT AAACGTGTTG AATTAGACGT TGAGTTTGAC
CGAGCGAGTG TGAAAGCCGC TATCGAGCAG TTTGTAACAA CCTATAACCA GTTTTATCAA
ACCACGCAAT CACTGAGTGG GTTTGATCCT GCGACAGGGC AAAGTGGTCC ATTGGCTGGG
GACAGTGTCG TTCGTTCTGC TGAATCTCGT TTAAAGTCAG TCTTTGTTGC TCCAGTAGAA
TCGGCACCTA AAGGGATAAA AACCTTGATC GAGCTTGGTA TCTCAACCAC TCGTCAAGGC
TCTTTAGAAA TCAATGATGC AATGCTTGAT CGTCAATTGA ATGAGAACTT CAGTCAAATG
CACACATTTT TTGACGGTTC TAAAGGTTTT GCTAAAAAAG TTGAAGACGT TATTCAAAGT
ATGACTGGGG TCGCGGGGCC AATTCGTACA CGTATGAATA CGTTACGTGA TCAGAATTAC
CGTTTAAATG ATCAACAAGT TGATTTAGAT CGTCGAATGG ACAGCGTTCA AGAGCGAACT
CGCAATAAAT TTGCCAACAT GCAAGATGTG ACAGGGAAAA TGAAAGCCCA ATTGTCTGGC
ATGATGAATG CGTTAGGTTA A
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| Protein sequence | MSMSPMGMGG GLDINSMVSK IVESERLPKQ QRIDRERSDI DMNISGYGRL QESLDTMKTL
MATFRQEDTF ASRSVNTSNE DAVHATASPD ALAGKYSIDV LQLAQAQKLA SSPVKEDARF
GPGELTIHLG EKEFSLTVVG DQNKITDIVR QINSAPGNPG VQSSIVKDDG GSRLILASDK
PGESNEIKID VKAKYNNTLH RFGFNPDFDP SVSTEYDIPT LLAQQSPQAP VQITKEEVKD
LSDEEKFAYF KPLIDNAKRE TAELDQAAKE IVQQQEATAA LSTLEDPTDP TSGMSGWSER
TAGTLQAALP SADEKIELAK AAKQGDQSAA EALAEIGQTP DTVFNAAGIT YEPSQPAPKK
DVVEIAKEKI EQVPTALKEI AKKKLEPIED LVDQMKPRKP LYSGLQEVQS ATSAKVVLDG
VARISSDTNV IQDAIQGIDL TLKNTTTKDG KRVELDVEFD RASVKAAIEQ FVTTYNQFYQ
TTQSLSGFDP ATGQSGPLAG DSVVRSAESR LKSVFVAPVE SAPKGIKTLI ELGISTTRQG
SLEINDAMLD RQLNENFSQM HTFFDGSKGF AKKVEDVIQS MTGVAGPIRT RMNTLRDQNY
RLNDQQVDLD RRMDSVQERT RNKFANMQDV TGKMKAQLSG MMNALG
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