Gene VSAL_I2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2309 
SymbolfliE 
ID6988537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2481932 
End bp2482243 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content41% 
IMG OID643380586 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_002263670 
Protein GI209695740 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG GTGGTATACA GGACGAAATG CAAGCAATGA TGCTAGACGC GACAAATACG 
ACGCGTCCAG CAACAGGTAA AGAAGTCGGT GCGGACTTCA GTGCTATGTT TGCAAAAGCA
GTAAATAACG TAAATGGTCT ACAACAAGCG TCAAGTGATT TGGCTGTGCG TTTTGACAGA
GGTGATGAAG GGGTTTCATT GTCTGACGTT ATGATCGCAA GAAATAAATC AAGTGTTGCT
TTTGATGCAA CCATTCAAGT ACGAAATAAG CTAGTAGACG CTTATAAAAC ACTAATGAAC
ATGCCTGTAT AA
 
Protein sequence
MKIGGIQDEM QAMMLDATNT TRPATGKEVG ADFSAMFAKA VNNVNGLQQA SSDLAVRFDR 
GDEGVSLSDV MIARNKSSVA FDATIQVRNK LVDAYKTLMN MPV