Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2300 |
Symbol | fliN |
ID | 6988546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2472985 |
End bp | 2473368 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643380578 |
Product | flagellar motor switch protein |
Protein accession | YP_002263662 |
Protein GI | 209695732 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCAA ATGAGCAACA AATGGCTGAC GAATGGGCAG CAGCATTAAG TGAAAGTGCA GAAGCAGTAA GTGCACCTCT GGAAGATTTA GAAGAAACAA CCCCTGCGTT TAACGAAGAT GAACGCCGTA AGCTTGATAC GATTCTAGAT ATTCCTGTGA CTATTTCTAT GGAGGTAGGG CGCTCACATA TTAGTATTCG TAACTTACTG CAACTTAACC AAGGTTCTGT GGTTGAGCTT GATCGTATCG CTGGTGAATC ACTGGACGTT ATGGTTAACG GCACGCTTAT CGCTCATGGC GAAGTCGTTG TCGTGAATGA CAAGTTTGGT ATTCGTTTAA CTGACGTTAT CAGCCAAACT GAACGTATTA AGAAATTGCG TTAA
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Protein sequence | MDSNEQQMAD EWAAALSESA EAVSAPLEDL EETTPAFNED ERRKLDTILD IPVTISMEVG RSHISIRNLL QLNQGSVVEL DRIAGESLDV MVNGTLIAHG EVVVVNDKFG IRLTDVISQT ERIKKLR
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