Gene VSAL_I2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2300 
SymbolfliN 
ID6988546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2472985 
End bp2473368 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content43% 
IMG OID643380578 
Productflagellar motor switch protein 
Protein accessionYP_002263662 
Protein GI209695732 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCAA ATGAGCAACA AATGGCTGAC GAATGGGCAG CAGCATTAAG TGAAAGTGCA 
GAAGCAGTAA GTGCACCTCT GGAAGATTTA GAAGAAACAA CCCCTGCGTT TAACGAAGAT
GAACGCCGTA AGCTTGATAC GATTCTAGAT ATTCCTGTGA CTATTTCTAT GGAGGTAGGG
CGCTCACATA TTAGTATTCG TAACTTACTG CAACTTAACC AAGGTTCTGT GGTTGAGCTT
GATCGTATCG CTGGTGAATC ACTGGACGTT ATGGTTAACG GCACGCTTAT CGCTCATGGC
GAAGTCGTTG TCGTGAATGA CAAGTTTGGT ATTCGTTTAA CTGACGTTAT CAGCCAAACT
GAACGTATTA AGAAATTGCG TTAA
 
Protein sequence
MDSNEQQMAD EWAAALSESA EAVSAPLEDL EETTPAFNED ERRKLDTILD IPVTISMEVG 
RSHISIRNLL QLNQGSVVEL DRIAGESLDV MVNGTLIAHG EVVVVNDKFG IRLTDVISQT
ERIKKLR