| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2293 |
|---|
| Symbol | flhA |
|---|
| ID | 6988532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2466352 |
|---|
| End bp | 2468445 |
|---|
| Gene Length | 2094 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643380571 |
|---|
| Product | flagellar biosynthesis protein FlhA |
|---|
| Protein accession | YP_002263655 |
|---|
| Protein GI | 209695725 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
|---|
| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTC AAATTCCACT ACCGAATAAA CTCTCTGCCT TAAAAGGCAA GAAAATCCCA
TCAATAGGTG CGCCGATTTT AGTGCTATCA GCACTAGCGA TGGTGATATT ACCGATCCCG
GCTTTTTTAC TCGATCTTAT GTTTACGTTC AATATCGCCT TAGCAATGGT TGTATTGTTA
GTGACAATCT ACACTCGTAG ACCTCTTGAT TTTGCTGCGT TCCCAACCAT TCTTCTTGTA
TCTACCTTAC TTCGCCTTGC TTTGAACGTG GCATCGACTC GTGTGGTATT GCTGCATGGT
CATGAAGGGC CGGGAGCGGC AGGTAACGTT ATCGAGGCGT TTGGTAATGT GGTTATCGGC
GGTAACTATG CGGTTGGTTT GATTGTTTTT ATTATCTTGA TGATCATTAA CTTTATGGTT
GTAACCAAAG GTGCGGGCCG TATTTCAGAA GTAAGTGCAC GTTTCACCTT GGATGCCTTA
CCAGGTAAAC AAATGGCGAT TGATGCGGAT TTGAATGCCG GCTTAATCGA TCAAGAACAA
GCAAGAACAC GTCGTTTTGA AGTCACCAAA GAAGCTGACT TTTACGGTTC AATGGATGGC
GCGTCAAAAT TTGTAAAAGG GGATGCCATT GCTGGTATCT TAATTCTATT TATTAATATT
ATTGGTGGCT TTGCCATCGG TATGGCGCAA TTTGATTTAG GTTTTAGTGA AGCGATTCAA
ATTTATACTT TGCTAACGAT TGGTGATGGC TTGGTTGCTC AAATCCCATC ATTACTATTG
TCGATTGGTG CTGCGATCAT GGTAACTCGT CAAAACACAG ACGAAGACAT GGGCGAGCAA
TTGGTGTTTC AATTAGTTGA TAACCCAAAA GCATTGATGG TAACGGGTGG GATCATGTTT
ATCATGGGTA TTGTTCCTGG AATGCCTCAT TTTCCATTTA TATTGCTTGC GATTCTGGCG
AGTGGTTGGG CGTATTACCT AACGAAGAAA AAAGCACAAG AGGGAGAAGA TAAAAAAGCA
GCACCTCCAA TGGAGTTGTC TTCTTCACAA CCTAAAGAAC TGTCATGGGA TGATGTTCAA
CCTGTCGATG TGATTGGATT AGAAGTTGGT TATCGTTTGA TCCCAATGGT AGATAAAGAA
CAAGGTGGCG AGCTTCTTGA CCGTGTTAAA GGGGTTCGTA AGAAGCTGTC TCAAGATTTC
GGTTTCTTGG TACCTGCGGT TCATATTCGA GATAATTTAG AACTGCCACC AAACGTATAC
AGAATTACCT TGATGGGTGT GGCCGGTGGC GAAGCTGAAA TTCGTCCAGA TAAAGAATTA
GCGATTAACC CAGGGCAAGT GTATGGCTCG ATTGAAGGTG AACCAACGCT TGATCCAGCC
TTTGGTCTTG AAGCCGTATG GATAAACGAA GAGCAAAGAG AGCATGCTCA AGCCTTAGGC
TATACTGTTG TAGATGCTGC AACGGTATTA GCAACCCATT TAAGTCAATT GTTAACAAAT
AATGCGGCGC AGTTATTAGG ACATGAAGAA GTTCAGAACT TATTAGAGTT GCTCTCACAA
AGCTCACCTA AATTAGTTGA AGGGTTAGTA CCCGATCAAT TACCGTTAGG GGCGGTTGTA
AAAGTACTTC AGAATTTATT GAATGAAGCA ATTCCAGTTC GTGATATTAG AACCATTGTC
CAAACTTTGT CTGAATATGC GCCAAAAAGT CAAGAACCCG ACATTTTGAC GGCCGCCGTC
AGAATTGCGC TAAAACGACT AATTGTTCAG GAAATCAATG GGGTAGAGGC TGAAATGCCT
GTTATTACCT TAATCCCAGA ACTGGAACAA ATTTTGCATC AAACTATGCA GGCGTCAGGC
GGTGAAACAA CGGGCATTGA ACCTGGTTTG GCTGAACGCT TGCAAGCTTC ATTAACGCTT
GCGACTCAAG AACAAGAGTT AAAAGGAGAG GCCGCTGTCT TGCTGACATC GGGGGTGTTG
CGTTCAACAT TAGCGAAATT TGTTAAGAAT ACAATTCCAA ATTTACGAGT GCTTTCTTAT
CAAGAAATTC CAGATGAGAA GCAAATTAGA ATAGTTCAAG CCGTTGGTCA TTAA
|
|---|
| Protein sequence | MKFQIPLPNK LSALKGKKIP SIGAPILVLS ALAMVILPIP AFLLDLMFTF NIALAMVVLL
VTIYTRRPLD FAAFPTILLV STLLRLALNV ASTRVVLLHG HEGPGAAGNV IEAFGNVVIG
GNYAVGLIVF IILMIINFMV VTKGAGRISE VSARFTLDAL PGKQMAIDAD LNAGLIDQEQ
ARTRRFEVTK EADFYGSMDG ASKFVKGDAI AGILILFINI IGGFAIGMAQ FDLGFSEAIQ
IYTLLTIGDG LVAQIPSLLL SIGAAIMVTR QNTDEDMGEQ LVFQLVDNPK ALMVTGGIMF
IMGIVPGMPH FPFILLAILA SGWAYYLTKK KAQEGEDKKA APPMELSSSQ PKELSWDDVQ
PVDVIGLEVG YRLIPMVDKE QGGELLDRVK GVRKKLSQDF GFLVPAVHIR DNLELPPNVY
RITLMGVAGG EAEIRPDKEL AINPGQVYGS IEGEPTLDPA FGLEAVWINE EQREHAQALG
YTVVDAATVL ATHLSQLLTN NAAQLLGHEE VQNLLELLSQ SSPKLVEGLV PDQLPLGAVV
KVLQNLLNEA IPVRDIRTIV QTLSEYAPKS QEPDILTAAV RIALKRLIVQ EINGVEAEMP
VITLIPELEQ ILHQTMQASG GETTGIEPGL AERLQASLTL ATQEQELKGE AAVLLTSGVL
RSTLAKFVKN TIPNLRVLSY QEIPDEKQIR IVQAVGH
|
|---|
| |