| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2292 |
|---|
| Symbol | flhF |
|---|
| ID | 6988533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2464834 |
|---|
| End bp | 2466288 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643380570 |
|---|
| Product | flagellar biosynthesis regulator FlhF |
|---|
| Protein accession | YP_002263654 |
|---|
| Protein GI | 209695724 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1419] Flagellar GTP-binding protein |
|---|
| TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCAG CTCTAGTTCA AGTAAAAGAA GAACTGGGTG TTGACGCCGT CATTATGTCA
AATAAAAAAG TCACTGGCGG TATTGAAATC GTAGCGGCAA TCGATCCTAA CGGTAGTTCA
ACGTCGTCTG CTGCGCCTGT ACGTCGTGAA ATTGAAGATG ACAGAGTGAA TGTAGGCAAT
AACAATAAAG GCTCTATGAC GCGTCGCTTT GCTAATATGA TAAAGCAATA TGGTTCAAAT
TCAGGGGCTC CTGCTGAACC TGAAAAGACA GAGCAACGTG AAGAAGACAG TTTAGCGGCT
TTGCTTCAGC GTCAATCTAA GTTTCAACAT CAATCAGTAT CATCAAAGCC TGCAACACAC
TCAAGACCTA AATTAGATAC GTCTGAAATG ACTCGTGCGA TTCAAAGTAA TCCAAACTTA
GCGCACCTTA TTTCGGATAA TCCAATGAAT GATCGTCCTG AGAGAATGCA GCCTAAATTA
GATCCTTCTC GTTATGAGAA AGGAAGACGA TCAAATCAAG AATCGAATGA AGATTTAGAA
GGCATGCGTT CTGAAATGTC GTCTATTCGT CGTTTGTTAG AACATCAAGT GTCAGGATTA
ATGTGGCAAG AAGTCGAGCG TAGAGAGCCA CTTCGAGCAA TGTTAATTAA ACGTTTAGAG
AAAATGGGTT TATCTGAAGA ATTAGCGGAT CAATTAGCGT GTTATATTCC TGAAGATACC
GAACCTAAAG ACGCATGGGC ATCATTACTA AAATTGTTAG CAGAGCAAAT TCCAACCACT
AAAGTCGATA CATTGGCTCG TGGTGGTATT GTTGCTTTGC TTGGTCCTAC TGGGGTTGGT
AAAACAACAA CAATCGCAAA ATTAGCAGCA AGAGCTGCAA TGGAATATGG ACCAGATCAA
GTTGCCTTAG TTACGACGGA CACTTTCCGT ATTGGGGCAC AAGAACAATT GGCTATTTAT
GGCCGAATCA TGGGTTGCCC AGTTCGAATT GCAAAAGATG CCGATGAACT TGCAACCGTC
TTATATCAAT TACGCAATCG CCGTTTAATT TTGGTAGATA CTGCGGGTAT GGGTCAACGT
GATGTTCGAT TAACAGAGCA ATTAGACACA TTAATGGAGC ATAGTGGCTC ACAAATAAAT
AGTTATTTAG TTATGCCAGC AACGGCACAA CGCCGAGTGC TACAAGAGAC GATCGATCAC
TTTAAACGTA TCCCATTGTC TGGGTGTATT TTAAGTAAGA TTGATGAGTC ATTGAGCTTA
GGTGAGTTAA TTAGTGTAAC CATCGAAAAT GGGTTACCGA TCTCTTATAT TGCTAATGGT
CAGCGCGTAC CTGAAGATAT CGTACTTGCT CAACCTAAAT ACCTAGTAGC TAAAGCAAAT
GAATTACTAG AAAAAGCGAC GGAAAAGGAC CCTCATTTCT GGAATAGCGA CATGCCAGAG
GCAAATAATT TATGA
|
|---|
| Protein sequence | MRSALVQVKE ELGVDAVIMS NKKVTGGIEI VAAIDPNGSS TSSAAPVRRE IEDDRVNVGN
NNKGSMTRRF ANMIKQYGSN SGAPAEPEKT EQREEDSLAA LLQRQSKFQH QSVSSKPATH
SRPKLDTSEM TRAIQSNPNL AHLISDNPMN DRPERMQPKL DPSRYEKGRR SNQESNEDLE
GMRSEMSSIR RLLEHQVSGL MWQEVERREP LRAMLIKRLE KMGLSEELAD QLACYIPEDT
EPKDAWASLL KLLAEQIPTT KVDTLARGGI VALLGPTGVG KTTTIAKLAA RAAMEYGPDQ
VALVTTDTFR IGAQEQLAIY GRIMGCPVRI AKDADELATV LYQLRNRRLI LVDTAGMGQR
DVRLTEQLDT LMEHSGSQIN SYLVMPATAQ RRVLQETIDH FKRIPLSGCI LSKIDESLSL
GELISVTIEN GLPISYIANG QRVPEDIVLA QPKYLVAKAN ELLEKATEKD PHFWNSDMPE
ANNL
|
|---|
| |