Gene VSAL_I2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2284 
Symbol 
ID6988322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2456845 
End bp2457936 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content39% 
IMG OID643380562 
ProductcheW-like protein 
Protein accessionYP_002263646 
Protein GI209695716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGTT TCAAACCATT GACCAGTGAA GAAGCACTCG AAGATTACTT TTCAGCATTA 
TTAAATGAAG AGGTTATTGA GCTTGAAGAT GATCAAGATA TTGAGATCAT TTTGCCAGAG
CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG CCAGAGCCAG AGCCAGAGCC AGAAATTACA
TGGACATCTG AAACGGTAAT GGTAGAAGAT CAGGTTACTT CTCACTATCA ACCACAATTA
GCACAACACA TTGATGATGA CGATGAATAC CCATTTGAGC TGCCTCAATT GGAGGATGTT
CAACGATTAT TAAGTCAATT AGAGAATTCA CAACTTGAAG CTCAGGTTGA AATTGATTCA
TTAATTACTG ATGAATTCGT AAAACAAGAA AAAGAAGATC TCGCTGTTGA AACGACAATA
GTGTCTCAAG ATGTGGTTAA TGACATTGAG AGTGAAGAAT CGAAAGAAGA ACTGGATCTT
TCTGATTGGG ATATTTCAGA TAAAATTGTT ACTAAAAAAC CAGAAGAAAT AAAAGAATTC
GATTCGATTT CTGAAGAACC TGCAATTGAT TCAGAGATAG AATTAGAGAC TCAAACAGGA
AAATCACCTC CTTTGAGTGG ATTAGATTGG AAGAACTCAG AATTAGATGA AGAGTTCCAA
GTCTTATTTT TTGAAGTGAT GGGCGTTACT TTTGCTGTGC CATTGGCTCA ATTAGGTGGC
ATACATCAGA TCACGGAATT GAATCATTTA ATTGGTCGTC CTGATTGGTA TCTTGGGTTA
CAAAATAATC GAGAAACCAC CATTGATGCG TTAGATACCG CGAAATGGGT GATGCCACAA
AGCATCAAAA ATGAGAGCTA CAAAGAGAAT TACCAATACC TTGTTATGCT TGGTGATAGC
AAATGGGGAT TAGCGTGTAA TGCGTTAGCC GGAACAGAAA CATTAACCAG TGATCGAATT
CGTTGGCGTG AAACCGCAGG AAAACGTCCG TGGTTGTCTG GAATGGTAAA AGAGAAAATG
TGTGCCTTGA TTCACGTTGA GGCAATGATT ACGATGCTTA ATGCCGGTCT CGACATTAAG
GGAATAGAGT AA
 
Protein sequence
MTSFKPLTSE EALEDYFSAL LNEEVIELED DQDIEIILPE PEPEPEPEPE PEPEPEPEIT 
WTSETVMVED QVTSHYQPQL AQHIDDDDEY PFELPQLEDV QRLLSQLENS QLEAQVEIDS
LITDEFVKQE KEDLAVETTI VSQDVVNDIE SEESKEELDL SDWDISDKIV TKKPEEIKEF
DSISEEPAID SEIELETQTG KSPPLSGLDW KNSELDEEFQ VLFFEVMGVT FAVPLAQLGG
IHQITELNHL IGRPDWYLGL QNNRETTIDA LDTAKWVMPQ SIKNESYKEN YQYLVMLGDS
KWGLACNALA GTETLTSDRI RWRETAGKRP WLSGMVKEKM CALIHVEAMI TMLNAGLDIK
GIE