| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2277 |
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| Symbol | ccmE |
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| ID | 6988311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2452835 |
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| End bp | 2453275 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380555 |
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| Product | cytochrome c-type biogenesis protein CcmE |
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| Protein accession | YP_002263639 |
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| Protein GI | 209695709 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCCAA GACGTAAAAA GCGCCTAGGG TTGATCCTTG CTCTAGTCCT AGGGGCGAGT
GCAACGGTTG GGTTGATGCT TTATGCATTG AATCAAAATA TGGATTTATT CTATACCCCA
ACAGAATTAG TGAATGGTAA GCCTGATGGA ACAAAACCTG AAGTCGGCCA ACGTTTACGT
ATCGGTGGTA TGGTTGTTGT AGGATCGGTT AAACGTGATT CTCAGTCTTT AGAAGTTCGT
TTTCAAGTCG AAGACATTGG CCCTAAAGTC ACCGTTATTT ATGATGGTAT TCTTCCTGAT
TTATTCCGTG AAGGCCAAGG TATTGTCGCG CAAGGTGTTC TTGTTGATGC GACAACAGTT
AAGGCTCATG AAGTATTAGC GAAACATGAT GAAGAGTACA TGCCGCCAGA GGTTGCAGAA
GCGATGAAAA AAACGCACTA A
|
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| Protein sequence | MNPRRKKRLG LILALVLGAS ATVGLMLYAL NQNMDLFYTP TELVNGKPDG TKPEVGQRLR
IGGMVVVGSV KRDSQSLEVR FQVEDIGPKV TVIYDGILPD LFREGQGIVA QGVLVDATTV
KAHEVLAKHD EEYMPPEVAE AMKKTH
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