| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2275 |
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| Symbol | dsbE |
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| ID | 6988312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2450284 |
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| End bp | 2450832 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380553 |
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| Product | thiol:disulfide interchange protein DsbE (cytochrome c biogenesis protein CcmG) |
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| Protein accession | YP_002263637 |
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| Protein GI | 209695707 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.643769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGT TTTTATTTGT GCCACTCGCT TTGTTTTTAC TTTTAGTTGC CGTGTTTGCT
ACCCAATTAA CGCGTAACTC AAATGGCGAT GATCCAACAA AACTGGAATC AGTTTTAGTG
GGTAAACCGG TACCTGAATT TCGCTTAGAA GATCTAGCGG AAAAAGGTAA GCTTTATGAT
CAAAGTATCT TTAGAGGCGA ACCTCTGCTT CTAAATGTAT GGGCGAAATG GTGTCCAACA
TGCTATGCAG AGCATCAATA CCTTAATACG CTGGCAACTG AAGGCGTAAA AATTATTGGT
ATGAACTATA AAGATGAGCG AGCAGGAACG GTCAAATGGC TTAAAGAATT AGGTAATCCA
TACTTAATTA CGTTGTTTGA TGGTGATGGC ATGCTAGGAA TGGATTTAGG TGTTTATGGT
GCGCCTGAGA CGTTCTTAAT CGATAGAAAT GGCATCGTTC GCTATCGTCA CGTTGGTGAT
GTAAATGATC GTAATTGGAA TGAGAAACTA AAACCAATGT ACGATCAACT AGTTGCGGAG
TCTAAATAA
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| Protein sequence | MKKFLFVPLA LFLLLVAVFA TQLTRNSNGD DPTKLESVLV GKPVPEFRLE DLAEKGKLYD
QSIFRGEPLL LNVWAKWCPT CYAEHQYLNT LATEGVKIIG MNYKDERAGT VKWLKELGNP
YLITLFDGDG MLGMDLGVYG APETFLIDRN GIVRYRHVGD VNDRNWNEKL KPMYDQLVAE
SK
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