| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2273 |
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| Symbol | |
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| ID | 6989369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2448561 |
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| End bp | 2449775 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380551 |
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| Product | putative cytochrome c-type biogenesis protein precursor |
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| Protein accession | YP_002263635 |
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| Protein GI | 209695705 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.21015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGT TTTGGATTTC AACCTTAGCC CTAATTTTTG TTGGTATCGC ATTCATCGTT
CTTCCGCTAT GGAAAGCTAA AGCGCAAGAT GATGATGCTC GCCGAGATGA ATTGAACAAA
GCGTTCTATA AAGATCGCTT ACTAGAGTTA GAAGAAGAAG ACGCTGAAGG TCTTGTGAAC
AATCAAGAAG AGTTGATCAC AGAGCTTAAA CAATCATTAC TTGATGATAT TCCAGCGCCA
GAGAAAGCAC AGCAAGACAG TATGGATGCA AAATTATTCA TCTTGCCATC TATTCTTGTG
TTTGTTGCTA TTTCTTACGG TTTTTACTTT AAGTTCGGTA ATATCGATAA AATTGAAAAA
TGGCATGAAG TTTCTGAACG TTTACCTGAG TTATCAAAAC AATTGATGAA TCCTGAAGGT
GTTTCGTTAA GTGATTCTGA AATGATCGAT TTAACGTTAG GACTTCGTAC TAAATTGTAT
GAAGAACCAA ACGATGCAAT GGGTTGGTTG TTATTAGGTC GTATTGGTAT GGCTAACCGA
GATATTGATA CTTCTGTTGG AGCAATGCAA AAAGCTTATA AGCTTAAGCC TGACGATGTT
GAAATTAAAT TGGGTTATGC GCAATCATTA ATGCTTTCTG GTGACGATGC GAAAGCAGAG
CAGTCGAAGA CATTACTTCG TCAAGTTCTG CGTCAAGACT CAACCAATCT ACGTGCATTA
TCATTATTAG CGTTCAGTGC GTTTGAGCGT CAAGATTATA AAGGTGCAGT ATCTGCTTGG
AAAGCGATGC AAATGCTGAT TGGTCCTGAT GATTCACGTT ATGAAATGCT AGTACGCAGT
ATTGAACGAG CAAAATCTAA GATGAACCCA GAAGCGACTT TAGATAAGCA AGTTCCTATC
ACTGTGAATT TAGGCTCTAA TGTGACGTTA CCTTCACAAG GTGTCGTGAT TGTTTCAATT
CACCCTGCGG ATGGTTCTGC TATGCCTGTT GCAGCGGCTC GTATCCCACT CAGCCGTTTT
CCTCTGAAAA TCATGATGTC AGATGACAAT AATATGATTG AACAGCGTAA GCTGTCGGAT
ATGCCTGATT TTATCGTTCG TGCACGTATT GACCAAGATG GCAATGTGTC TACGAAAGAA
GGAGATTGGT ATGGTGAGAG CGCAGTCAGC ACATTAGGAA AGAATGTATC GCTTGATATT
GATAAGCAAT ACTAA
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| Protein sequence | MSLFWISTLA LIFVGIAFIV LPLWKAKAQD DDARRDELNK AFYKDRLLEL EEEDAEGLVN
NQEELITELK QSLLDDIPAP EKAQQDSMDA KLFILPSILV FVAISYGFYF KFGNIDKIEK
WHEVSERLPE LSKQLMNPEG VSLSDSEMID LTLGLRTKLY EEPNDAMGWL LLGRIGMANR
DIDTSVGAMQ KAYKLKPDDV EIKLGYAQSL MLSGDDAKAE QSKTLLRQVL RQDSTNLRAL
SLLAFSAFER QDYKGAVSAW KAMQMLIGPD DSRYEMLVRS IERAKSKMNP EATLDKQVPI
TVNLGSNVTL PSQGVVIVSI HPADGSAMPV AAARIPLSRF PLKIMMSDDN NMIEQRKLSD
MPDFIVRARI DQDGNVSTKE GDWYGESAVS TLGKNVSLDI DKQY
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