Gene VSAL_I2271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2271 
Symbol 
ID6987693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp2446974 
End bp2447582 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content38% 
IMG OID643380549 
Productinner membrane protein 
Protein accessionYP_002263633 
Protein GI209695703 
COG category[S] Function unknown 
COG ID[COG3647] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00647777 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATTT CTATGACTCT TAAAAAGCAG CCTATTTTTC TCGTATTAAC CAATATTTAT 
TTCATCGTTT TATTGTTCTC AGCAATTGAG CCTTCATCAC GAGCCGTTTG GTTTGCCGAA 
ATCTTACCAG CCCTACTCAT TTTAATAGGA ATTTATTACG TATCCCTTCG ATTTACGTTC 
AGTAAAACCG CCTATGTCTT AATGTTTATC TGGCTTATTC TTCATACCAT CGGCGCTAAA 
TATACGTTTG CTGATGTTCC CTTTGATTGG TTTAATCAAT TGATCGGTTC TGACCGTAAT 
AACTTTGATC GGGTCGCTCA TTTCTCTATT GGTTTTTACG CTTACCCGAT TGCAGAATAT 
TTGATTAAAA CAAAAAAATG TTCTGCTCCA CTTGCCATGT TATTCGGTTT ATTTACATTA 
ATGAGTGTTG CTGCAGGCTA TGAAATTATT GAATGGTGGT ACGCGGCAGT TGCAGGAGGA 
GAAGAAGGCA TCGCTTTCTT AGGATCTCAA GGCGATATCT GGGATGCTCA AAAGGACATG 
TTATGTGACA CTTCAGGATC ACTCGTCGCT TTATTATTGA TGATGGTTCA ACGTAAAAAG 
AATAACTAG
 
Protein sequence
MSISMTLKKQ PIFLVLTNIY FIVLLFSAIE PSSRAVWFAE ILPALLILIG IYYVSLRFTF 
SKTAYVLMFI WLILHTIGAK YTFADVPFDW FNQLIGSDRN NFDRVAHFSI GFYAYPIAEY 
LIKTKKCSAP LAMLFGLFTL MSVAAGYEII EWWYAAVAGG EEGIAFLGSQ GDIWDAQKDM 
LCDTSGSLVA LLLMMVQRKK NN