| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2270 |
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| Symbol | |
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| ID | 6987692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2445467 |
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| End bp | 2446783 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380548 |
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| Product | outer membrane protein transport protein |
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| Protein accession | YP_002263632 |
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| Protein GI | 209695702 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000125338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATA ATAAAAACCG TCTTTCTATC GCAGTGGCTC TTGGCCTTTT AGGTTCAGTA
GCAAGCTCAC ACACTATGGC TGCCGGCTTC CAACTTGCTG AATATTCAGC AACAGGTTTA
GGCCGCGCAT ACGCAGGTGA AGCCGCTATC GCAGATGGCG CTGATGCACA ATGGCGTAAC
GTTGCAATGC TAACGTACTT AGAAGGCACT CAAGTTTCTG TTGGCGGTAT TTACGTAAAC
CCAAATATTG ACGTTGAAGG TGTTTCTACT CAAAGATCTG GAACCACATC AACTAAATCA
GAAGATTTTG CTCACGATGC TTTTATCCCT AACTTATACG TTTCTCATCG AGTAAATGAA
CAAGTAGCAA TTGGTTTTGC GGTTGGCACT AACTACGGTA TGGAAACAGA CTTAGGTTCT
GATTTTTCAG CAACTAACTT TGGTAACGAA GCAAGCGTCA TTACTAAAGA AATTAACGTA
AATATGGCTT ACAAAATTAA CCAACAATTC AGTGTTGGTG GCGGTGTTCG TTATGTTATT
GCTGAAGGCA GTTTTGGTGC AACAATTCCA AATCAAAGTC CGACTCATAT CCCAACACCA
ATTGGAAATA TACCGTTACC ACCAGCAGGA ACAACGCTGA AATACATGGA AGGCACTGAT
GAAGCGTGGG GATGGCAAGT TGGTACTGCA TGGCAAATCA ATGATGCTAA CCGTATTGGC
TTTAGCTACA AATCAGAAGT AAAACTTGAT TTAGCTGGCC ATGCAAAAGG GGCGGCTTTC
AATCCGAAAA ACCCAACACA ACACTTTGCT GGTTCAATGG CTTTAGATTT ACCAGCAACA
GCCGAGTTAG CAAGTTATCA CCAATTAACA GATAAAGTCG CTATTCATGC GAGCTTTAAC
TGGACAGATT GGAGCAGCTT TGAAAAATTA GAAGCTAATA TCCCCACATT AGGTGGCAAA
GACCTAATCA AAGAAGAGAA TTGGGAAGAT AACTACCGTT TAGCCTTTGG TGGTACTTAT
CAATTAAACC AAAAAGTAAC TCTACGATCT GGTGTTGCTT ATGACACATC AGCAGTAAGT
GATGAAGACC GCACCGCGAC AATTCCTGAA ACGGACCGTT TATGGCTGAG TACTGGTGTA
GGCTACGCGT GGTCTAACAA TTTAACTCTA GATGCTGGCT TTACTTACAT CTTCGCAAAA
GATGCAAAAA TGTCTGAAGA TCAGGGAGAT GAAGCAGCTC TATTCGGTGG TACTTTCGAC
GGCGAAACGA CAGGTAACGT ATGGTTAGTA GGTGTTCAAG CGAACTACCG CTTCTAA
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| Protein sequence | MNNNKNRLSI AVALGLLGSV ASSHTMAAGF QLAEYSATGL GRAYAGEAAI ADGADAQWRN
VAMLTYLEGT QVSVGGIYVN PNIDVEGVST QRSGTTSTKS EDFAHDAFIP NLYVSHRVNE
QVAIGFAVGT NYGMETDLGS DFSATNFGNE ASVITKEINV NMAYKINQQF SVGGGVRYVI
AEGSFGATIP NQSPTHIPTP IGNIPLPPAG TTLKYMEGTD EAWGWQVGTA WQINDANRIG
FSYKSEVKLD LAGHAKGAAF NPKNPTQHFA GSMALDLPAT AELASYHQLT DKVAIHASFN
WTDWSSFEKL EANIPTLGGK DLIKEENWED NYRLAFGGTY QLNQKVTLRS GVAYDTSAVS
DEDRTATIPE TDRLWLSTGV GYAWSNNLTL DAGFTYIFAK DAKMSEDQGD EAALFGGTFD
GETTGNVWLV GVQANYRF
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