Gene VSAL_I2252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2252 
SymbolptsG 
ID6987676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2421738 
End bp2423168 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content42% 
IMG OID643380534 
ProductPTS system glucose-specific transporter subunits IIBC 
Protein accessionYP_002263617 
Protein GI209695688 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR02002] PTS system, glucose-specific IIBC component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA ACCTTTTTGC CAGTTTACAG AAAGTTGGTA AGGCACTTAT GTTGCCAGTA 
TCAGTTCTTC CTGTTGCTGG TATTCTTTTA GGAGTTGGTG CAGCCAACTT TAGTTTCCTT
CCAGAAGTTG TTTCTCATTT AATGGAACAA GCTGGTGGTT CAGTATTCGG CCAAATGGCA
CTACTCTTTG CAGTTGGTGT TGCTCTTGGT TTCACAAATA ATGACGGTGT AGCAGGTCTT
TCTGCTATCG TTGGTTATGG CATCATGACA GCAACACTAG GCGTAATGGC TGAAGTGATG
GGTGTTGATG GCATCGAAAC GGGTGTTCTT GGTGGTATTC TTGCGGGTGG TGTTGCTGGT
TGGGCATTTA ATCGTTTTTA CCGTATTCAA CTTCCTGAAT ATTTAGGCTT CTTTGCTGGT
AAACGTGCAG TACCTATCAT TACTGGTTTT GTATCAATTG CTTTGGGTGT GATTTTATCT
GTTATCTGGC CACCAATTGG TTCAGTAATC GCGTCTTTCT CTGATTGGGC TGCTCATCAG
AACCCAGTAG CTGCTTTTGG TATCTACGGT GTTGTTGAAC GTTCTCTAAT TCCTTTTGGT
TTACACCATA TCTGGAACGT ACCATTCTTC TATGAAGCGG GTTCTTGTGT AAATAATGCG
GGTGAACAAG TTCACGGTAT TATGACTTGT TTCCTAACCG CTGATGATGC GTCTCGTGCT
GCGAGTAATG GTTTCGGTCA ACTTGCTGGT GGTTACTTGT TTAAAATGTT CGGTCTTCCT
GCTGCTGCAA TCGCGATTGC ACATTCAGCA AAACCTGAAA ACCGTGCAAA AGTAATGGGT
ATCATGGCAT CTGCTGCGTT AACTTCATTC CTTACTGGTA TTACAGAACC GATTGAATTT
GCATTCTTAT TTGTTGCTCC TGTTCTTTAT GCTATTCACG CAGCTCTTGC TGGCGTGGCA
TACATGCTGA CTAACGCATT AGGTATTGTT CACGGTCACA CATTCTCAAA TGGTTTCATT
GACTTCATTG TTCAATCTCC ACATGCTGAG AAAATGCCTC TTCTAATTGG ATTAGGTCTT
GTTTACGCTG CTGTTTACTA CATCGTATTC CGCTTTGTGA TTAAAGCAAT GAACCTTAAA
ACGCCAGGTC GTGAAGATGA AGATGACAAT GCAGCTCCAG TAGTAACTGG TACTGAATTG
GCAGGTGAAC TTGTTGCTGC CTTTGGTGGT AAAGAGAACA TCACCAACTT AGATGCTTGT
ATTACTCGCT TACGCGTTTC TGTAGCAAGT GTAGAAGCGG TAAACCAAGA CAGACTGAAA
CAACTAGGTG CAGCAGGCGT TGTTGTTGCT GGTTCTGGTG TTCAGGCAAT TTTTGGTACT
AAATCAGATA ACTTGAAAAC AGACATGAAT GAATGGATTA GCCATAACTA A
 
Protein sequence
MFKNLFASLQ KVGKALMLPV SVLPVAGILL GVGAANFSFL PEVVSHLMEQ AGGSVFGQMA 
LLFAVGVALG FTNNDGVAGL SAIVGYGIMT ATLGVMAEVM GVDGIETGVL GGILAGGVAG
WAFNRFYRIQ LPEYLGFFAG KRAVPIITGF VSIALGVILS VIWPPIGSVI ASFSDWAAHQ
NPVAAFGIYG VVERSLIPFG LHHIWNVPFF YEAGSCVNNA GEQVHGIMTC FLTADDASRA
ASNGFGQLAG GYLFKMFGLP AAAIAIAHSA KPENRAKVMG IMASAALTSF LTGITEPIEF
AFLFVAPVLY AIHAALAGVA YMLTNALGIV HGHTFSNGFI DFIVQSPHAE KMPLLIGLGL
VYAAVYYIVF RFVIKAMNLK TPGREDEDDN AAPVVTGTEL AGELVAAFGG KENITNLDAC
ITRLRVSVAS VEAVNQDRLK QLGAAGVVVA GSGVQAIFGT KSDNLKTDMN EWISHN