Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2245 |
Symbol | tmk |
ID | 6987670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2415595 |
End bp | 2416227 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643380527 |
Product | thymidylate kinase |
Protein accession | YP_002263610 |
Protein GI | 209695681 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0597865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAT TTATTGTTAT TGAAGGCCTT GAAGGCGCGG GTAAAAGCAC CGCAATTAAG AACGTATTAG CAACACTGGC TAAGCATGGA ATTACAGCAC CAGTGACGAC AAGAGAGCCC GGTGGAACGC CGTTAGCCGA AAAAATGCGC GAACTAGTAA AGCAAGGACA TCCTGATGAG CCATTAACGG ACATGGCCGA GTTATTACTA TTGTATGCAG CACGAGCTCA GTTAGTTGGT AATGTTATTA AACCAGCTTT AGCCGCAGGT AATTGGGTGG TTGGTGATCG TCATGATCTG TCATCTCAGG CTTATCAAGG CGGTGGTCGT GGTTTTGACC GTGAGTTAAT GGCGACCATG AAAAGAACAG TACTTGGTGA TTTTACACCA GACTTAACTA TCTATATGGA TATTGATCCG AAGTTAGGGT TACAGCGTGC TTCTGCTCGT GGTGAGCTAG ATAGAATCGA ACAAATGAAA CTGGATTTCT TTGAACGCAG TCGTGAACGT TATTTAGAAT TTGCTAATAA TGACGAAAGT ATTATAACCA TTGATGCAGG ACAAGACTTA GATACGGTAA CAGCATCGAT TATTGCCGCT TTAGAAATAT GGTTAGCGAC GAATGGCAAC TAA
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Protein sequence | MSKFIVIEGL EGAGKSTAIK NVLATLAKHG ITAPVTTREP GGTPLAEKMR ELVKQGHPDE PLTDMAELLL LYAARAQLVG NVIKPALAAG NWVVGDRHDL SSQAYQGGGR GFDRELMATM KRTVLGDFTP DLTIYMDIDP KLGLQRASAR GELDRIEQMK LDFFERSRER YLEFANNDES IITIDAGQDL DTVTASIIAA LEIWLATNGN
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