| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2240 |
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| Symbol | fabD |
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| ID | 6988470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2410270 |
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| End bp | 2411193 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380522 |
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| Product | malonyl CoA-acyl carrier protein transacylase |
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| Protein accession | YP_002263605 |
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| Protein GI | 209695676 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000615586 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAATT TTGCTATCGT TTTTCCAGGC CAAGGCTCAC AAGCTGTAGG CATGCTTGCT
GAATTAGGTG AGCAACATGA AGTGGTAACA CAAACTTTTG CAGAAGCATC TGAAGCATTA
GGTTATGACT TATGGTCTTT GGTTCAAAAT GGTCCAGCTG AAGATTTAAA TCAAACATTT
CGCACTCAGC CAGCATTATT AGCAACCTCT GTTGCATTAT GGCGTGTGTG GCAAGAACAA
GGCTTAGCAC AACCAAGTGT TTTAGCTGGT CATAGTCTTG GTGAGTATTC TGCTCTTGTC
TGTGCTGGTG TTATTGACTT TAAAGAAGCG ATAAAATTAG TTGAGCTACG TGGTCAATTA
ATGCAAGAAG CGGTTCCTGC GGGGGTTGGT GCTATGTTTG CTATCATCGG CTTAGACAAT
GATTCTATTG CTAAAGCATG TGAAGATGCA GCACAAGATG AAGTCGTTTC TCCTGTTAAC
TTTAATTCTC CAGGTCAAGT TGTTATTGCG GGTAATAAAG ATGCTGTTGA GCGTGCTGGT
GTATTGTGTA AAGAAGCGGG CGCTAAGCGA GCACTTCCTC TACCAGTATC AGTGCCTTCT
CATTGTGCAT TAATGAAGCC TGCAGCTGAT AAATTAGCCG TTGCGTTAGA AAGCATTGAG
TTCTCAACAC CTGTTTTACC TGTTATTAAT AACGTTGATG TTATTGCAGA GACGGATCCT
GAAAAAATTA AAGACGCACT TGTTCGTCAA TTATATTGTC CAGTACGTTG GACTGAAGTC
GTTGAACAAA TGGCTGAACA AGGTGTCGAA ATGTTGTATG AAGTTGGTCC AGGTAAAGTA
CTTACTGGTT TAACTAAACG AATCGTAAAA TCACTTAGCG CTGCAGCGGT TAATGATGCC
GCTTCTCTTG AAGCTGCTAA GTAA
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| Protein sequence | MSNFAIVFPG QGSQAVGMLA ELGEQHEVVT QTFAEASEAL GYDLWSLVQN GPAEDLNQTF
RTQPALLATS VALWRVWQEQ GLAQPSVLAG HSLGEYSALV CAGVIDFKEA IKLVELRGQL
MQEAVPAGVG AMFAIIGLDN DSIAKACEDA AQDEVVSPVN FNSPGQVVIA GNKDAVERAG
VLCKEAGAKR ALPLPVSVPS HCALMKPAAD KLAVALESIE FSTPVLPVIN NVDVIAETDP
EKIKDALVRQ LYCPVRWTEV VEQMAEQGVE MLYEVGPGKV LTGLTKRIVK SLSAAAVNDA
ASLEAAK
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