| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2226 |
|---|
| Symbol | metG |
|---|
| ID | 6989051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2391897 |
|---|
| End bp | 2393957 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643380508 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_002263591 |
|---|
| Protein GI | 209695662 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000556353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCG ATCCGAGAAA AATTCTGGTT ACATGTGCCC TACCGTATGC AAACGGTTCA
ATCCACTTAG GCCACATGCT TGAGCATATC CAAGCGGATA TCTGGGTTCG TTACCAACGC
TTACGTGGCA ACGACATTAA CTTTATTTGT GCAGATGACG CTCACGGCAC TCCAATCATG
CTTAAAGCTC AACAGATGGG TATCACTCCA GAAGAAATGA TTGCAGCAGT TAGCGAAGAA
CATCAAAAAG ATTTCGCAGG CTTCGACATT AGCTTTGATA ACTATCACAG CACACACAGT
GATGAAAACC GTGAATTAGC GTCTAGTATC TACCTAGAAT TGAAAAAAAA TGGCTTTATT
ACTAGCCGTA CAATTTCTCA GTTATTTGAT CCAGAAAAAG AAATGTTCTT ACCTGACCGT
TTCGTAAAAG GTACGTGTCC AAAATGTAAA TCTGAAGAAC AATACGGGGA TAACTGTGAT
AACTGTGGCG AAACCTACAG CCCAACGGAT CTTATCAACC CTAAATCAGC CGTTTCTGGT
GCGACTCCAG TAATGAAAGA TTCTGAACAT TTCTTCTTTG ACTTACCTCA GTTTGAAAGT
ATGTTAAAAG AGTGGACTCG TTCTGGCTCT CTTCAAACTG AAACAGCAAA CAAAATGCAA
GAATGGTTTG AATCTGGCCT ACAACAATGG GACATCTCAC GTGATGCACC TTATTTTGGC
TTTGAAATCC CAGGCGAAAC CAATAAATTC TTCTATGTTT GGTTAGATGC ACCGATTGGT
TACATGGGTT CATTTAAAAA TCTATGTGAT AAACGTGATG ATTTAGACTT TGATGAGTAT
TGGAAACTAA ACAGCACAAC AGAGCTTTAC CACTTTATCG GTAAAGATAT TGTTTATTTC
CATAGCCTAT TTTGGCCTGC AATGCTTGAT GGTGCTGGCT TCCGTAAACC AAACAATGTA
TTTGTTCATG GTTACGTAAC GGTAAATGGC GCAAAAATGT CTAAGTCGAA AGGCACATTC
ATTAAAGCTG GCACTTACTT AAATCACCTA GACCCAGAAT GCCTACGTTA CTACTACGCC
GCTAAACTAA ATAGCCGTAT TGATGATATT GATTTAAACC TTGAAGATTT CACTCAACGT
GTAAACTCAG ATGTCGTAAA CAAGATTGTT AACTTAGCAT CTCGTAATGC TGGTTTCATT
ACTAAACGTT TTGACGGCAA ACTGTCTGAT AATTTTGTGG CTCCTGAGCT CTACAACGAA
TTCGTTGCTG CTTCAGATCG TATTGCTGAG CTATATGAAA CTCGTGAATT TAGTCGTGCT
ATTCGTGAAA TTACCGCGCT TGCTGATAAA GCAAACCAAT ACATTGACGA AAAAGCACCT
TGGGTTCTTG CGAAAGAAGA AGGCAAAGAA CAAGAGCTAC AAGAAGTTGC TTCTGTGGGT
ATTAACTTGT TCCGTGTGCT AATGGCTTAC CTAAAACCAG TAATGCCTGA ACTTGCAGCA
CGAACTGAAG CCTTCTTAAA CGAAACGTTA ACGTGGGAAT GTATTGCACA ACCTCTAACT
TCTCATGAAA TCACGAAGTT TAAAGCACTG TTCAACCGTA TTGATCCTAA GAAAGTAGAA
GCAATGGTTG AAGAATCAAA AGAAGATGCT GCAATTGAAA TGGCTGCAAA AGAGAAAGCA
GAAGCGGAAA AAGAAAAAGC AAACCAAACA GAACTAGACA AAGAACCAAT CGCGGATGAG
ATTGAATTCG ATGCATTCGA AGCGGTTGAT ATGCGTATTG CTCGTATTAT CTCTTGTGAA
GAAATTCCAA AGGCAAACAA ACTACTTAAA TTTCAGCTAG ACATTGGCGG TGAAACTCGT
CAAGTATTTT CAGGGATTAA ATCTGCATAC ACACCTGAAG AATTAGTTGG TAAGCATACT
GTGATGGTTG CTAACCTAAA ACCTCGTAAA ATGAAGTTTG GTATGTCTGA AGGCATGATT
CTGGCTGCTG GCCCTGGTGG TAAAGATCTT TGGATCCTTG AACCACACGA AGGTGCTCAA
CCTGGTATGC GTGTAATGTA A
|
|---|
| Protein sequence | MATDPRKILV TCALPYANGS IHLGHMLEHI QADIWVRYQR LRGNDINFIC ADDAHGTPIM
LKAQQMGITP EEMIAAVSEE HQKDFAGFDI SFDNYHSTHS DENRELASSI YLELKKNGFI
TSRTISQLFD PEKEMFLPDR FVKGTCPKCK SEEQYGDNCD NCGETYSPTD LINPKSAVSG
ATPVMKDSEH FFFDLPQFES MLKEWTRSGS LQTETANKMQ EWFESGLQQW DISRDAPYFG
FEIPGETNKF FYVWLDAPIG YMGSFKNLCD KRDDLDFDEY WKLNSTTELY HFIGKDIVYF
HSLFWPAMLD GAGFRKPNNV FVHGYVTVNG AKMSKSKGTF IKAGTYLNHL DPECLRYYYA
AKLNSRIDDI DLNLEDFTQR VNSDVVNKIV NLASRNAGFI TKRFDGKLSD NFVAPELYNE
FVAASDRIAE LYETREFSRA IREITALADK ANQYIDEKAP WVLAKEEGKE QELQEVASVG
INLFRVLMAY LKPVMPELAA RTEAFLNETL TWECIAQPLT SHEITKFKAL FNRIDPKKVE
AMVEESKEDA AIEMAAKEKA EAEKEKANQT ELDKEPIADE IEFDAFEAVD MRIARIISCE
EIPKANKLLK FQLDIGGETR QVFSGIKSAY TPEELVGKHT VMVANLKPRK MKFGMSEGMI
LAAGPGGKDL WILEPHEGAQ PGMRVM
|
|---|
| |