| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2225 |
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| Symbol | pyrF |
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| ID | 6987662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2391116 |
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| End bp | 2391820 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380507 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_002263590 |
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| Protein GI | 209695661 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000264072 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGACC AAAAGGTAAT TGTGGCATTG GATTATGACC GTCAAGCTGA CGCATTGGCG
TTCGTGGATA AAATTGATCC TAGCTCGTGC CGATTAAAAG TGGGTAAAGA GATGTTTACT
CTTTTTGGCC CTGAGTTTGT AAAAGAACTT CATAAGCGTG GTTTTTCTGT TTTTCTAGAT
TTAAAATTTC ATGATATTCC TAATACGTGT TCAAAAGCAG TTCGTGCAGC TGCTGAAATG
GGGGTTTGGA TGGTAAATGT TCATGCGAGT GGTGGTGAGC GGATGATGAC AGCTTCGCGT
GAGATTTTAG AACCGTATGG CAAAGATCGC CCATTATTAA TTGGTGTGAC TGTTTTAACG
AGCATGGAAC AGCAAGATTT AGCGGGTATT GGTTTAGATA TCGCACCACA AGAGCAAGTT
AAACGTCTTG CTGCATTAAC AAAAAACAGT GGTTTGGACG GAGTAGTTTG CTCAGCTCAA
GAAGCATCAA TGCTAAAAGC TGACCTAGGT AAATACTTTA AGTTAGTAAC ACCTGGTATC
CGTCCTGTGG GTTCAGACGT TGGTGATCAA AAACGTATCA TGACTCCAGT TGATGCGATT
ATTTCAGGAT CTGATTACTT GGTAATTGGG CGCCCAATTA CTCAAGCTGA AAACCCATCA
CAAGTATTAA ATGACATTAA TTTGTCGTTG GCTCCCGTCT TATAA
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| Protein sequence | MKDQKVIVAL DYDRQADALA FVDKIDPSSC RLKVGKEMFT LFGPEFVKEL HKRGFSVFLD
LKFHDIPNTC SKAVRAAAEM GVWMVNVHAS GGERMMTASR EILEPYGKDR PLLIGVTVLT
SMEQQDLAGI GLDIAPQEQV KRLAALTKNS GLDGVVCSAQ EASMLKADLG KYFKLVTPGI
RPVGSDVGDQ KRIMTPVDAI ISGSDYLVIG RPITQAENPS QVLNDINLSL APVL
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