Gene VSAL_I2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2224 
Symbol 
ID6989426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2389891 
End bp2391060 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content38% 
IMG OID643380506 
Producttetratricopeptide repeat protein 
Protein accessionYP_002263589 
Protein GI209695660 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2956] Predicted N-acetylglucosaminyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000811789 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAGC TGCTATTCCT ACTATTACCT ATTGCTGCCG GCTATGGTTG GTATATGGGT 
AATCGGAATG CTGGACAACA ACGTCAAAGA GAAACGAATC ACCTGTCTCG TCAATACGTG
ACGGGTTTGA ATTTATTGTT GTCTGATCAA TCAGATAAAG CCGTCGATCA CTTTATTGAA
TTACTTCAAG TTGACAGTGA TACCATTGAT ACCCATCTTG CTCTAGGCAA TCTTTTTAGA
AGCAAAGGTG AGGTTGATCG CGCTATTAAA ATCCACCAAA ATCTCATCGC TCGTCCTAAT
CTTACTCTTG AACAACGAAA TATTGCTCTC CAACAATTAG CCAAAGATTA TATGGTTGCA
GGTATTCTTG ATCGTGCTGA AAAAATATTT GAGCAATTGG TCGACGAACC AGAGCATAAA
GAAGCCGCAT TATTGCAACT TGTATCTATC CATCAGCAAA CCCGTGAATG GGAACAAGCC
ATTAAATTTG CAAATAGTTT GGTTAGGATG GGAAAGAAAA AAATCAAGCC AGACATTGCC
CATTATTATT GTGAATTAGC AACATTAGAC TTAGCTGAAG AGAATATTAA TGCAGCGAAG
CAACATTTAA AGAAAGCACT GTCGACGGAT AATTTATGCG TTAGAGCATC AATAATGATG
GCTAAGCTTT TAATGAAAGA AAACAATCAT AAAGCTGCCG TTAGCCAATT AGAATCAGTA
TTAGATCAAG ATATTGATTT TGTCAGTGAG GCATTACCTT TACTTGCTGA ATGTTATGAA
ACGTTAGATA GAGAAGGTGT ATTACTGCAC TTCTTAAAAG AGGCTATTTC GAAAGGTTCA
GGCGCAAGTG CTGAATTAAT GTTGTCGAAT CTGATTGCAA AGCATGAAGG TACCGCTGTA
GCTCAAGGCT ACATGACGAA ACAGTTATTA AAAAACCCAA CAATGAAAGG CTTTTATCGT
TTAATGGGCT ATCACGTAGA TGAAGCTGAA AACGGTCGAG CAAAAGCGAG CTTATCAAGC
TTGCAAAACC TAGTTGGTGA ACAATTAAAA ATGAAGCCAA ATTATCGATG CAGTAAATGT
GGATTTTCTG CACATCGTTT ATTTTGGCAA TGTCCTTCCT GTAAAGGGTG GGGGGTTATT
AAGCCAATTA GAGGCTTAGA CGGTGAATAA
 
Protein sequence
MLELLFLLLP IAAGYGWYMG NRNAGQQRQR ETNHLSRQYV TGLNLLLSDQ SDKAVDHFIE 
LLQVDSDTID THLALGNLFR SKGEVDRAIK IHQNLIARPN LTLEQRNIAL QQLAKDYMVA
GILDRAEKIF EQLVDEPEHK EAALLQLVSI HQQTREWEQA IKFANSLVRM GKKKIKPDIA
HYYCELATLD LAEENINAAK QHLKKALSTD NLCVRASIMM AKLLMKENNH KAAVSQLESV
LDQDIDFVSE ALPLLAECYE TLDREGVLLH FLKEAISKGS GASAELMLSN LIAKHEGTAV
AQGYMTKQLL KNPTMKGFYR LMGYHVDEAE NGRAKASLSS LQNLVGEQLK MKPNYRCSKC
GFSAHRLFWQ CPSCKGWGVI KPIRGLDGE