Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2224 |
Symbol | |
ID | 6989426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2389891 |
End bp | 2391060 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643380506 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_002263589 |
Protein GI | 209695660 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000811789 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAGC TGCTATTCCT ACTATTACCT ATTGCTGCCG GCTATGGTTG GTATATGGGT AATCGGAATG CTGGACAACA ACGTCAAAGA GAAACGAATC ACCTGTCTCG TCAATACGTG ACGGGTTTGA ATTTATTGTT GTCTGATCAA TCAGATAAAG CCGTCGATCA CTTTATTGAA TTACTTCAAG TTGACAGTGA TACCATTGAT ACCCATCTTG CTCTAGGCAA TCTTTTTAGA AGCAAAGGTG AGGTTGATCG CGCTATTAAA ATCCACCAAA ATCTCATCGC TCGTCCTAAT CTTACTCTTG AACAACGAAA TATTGCTCTC CAACAATTAG CCAAAGATTA TATGGTTGCA GGTATTCTTG ATCGTGCTGA AAAAATATTT GAGCAATTGG TCGACGAACC AGAGCATAAA GAAGCCGCAT TATTGCAACT TGTATCTATC CATCAGCAAA CCCGTGAATG GGAACAAGCC ATTAAATTTG CAAATAGTTT GGTTAGGATG GGAAAGAAAA AAATCAAGCC AGACATTGCC CATTATTATT GTGAATTAGC AACATTAGAC TTAGCTGAAG AGAATATTAA TGCAGCGAAG CAACATTTAA AGAAAGCACT GTCGACGGAT AATTTATGCG TTAGAGCATC AATAATGATG GCTAAGCTTT TAATGAAAGA AAACAATCAT AAAGCTGCCG TTAGCCAATT AGAATCAGTA TTAGATCAAG ATATTGATTT TGTCAGTGAG GCATTACCTT TACTTGCTGA ATGTTATGAA ACGTTAGATA GAGAAGGTGT ATTACTGCAC TTCTTAAAAG AGGCTATTTC GAAAGGTTCA GGCGCAAGTG CTGAATTAAT GTTGTCGAAT CTGATTGCAA AGCATGAAGG TACCGCTGTA GCTCAAGGCT ACATGACGAA ACAGTTATTA AAAAACCCAA CAATGAAAGG CTTTTATCGT TTAATGGGCT ATCACGTAGA TGAAGCTGAA AACGGTCGAG CAAAAGCGAG CTTATCAAGC TTGCAAAACC TAGTTGGTGA ACAATTAAAA ATGAAGCCAA ATTATCGATG CAGTAAATGT GGATTTTCTG CACATCGTTT ATTTTGGCAA TGTCCTTCCT GTAAAGGGTG GGGGGTTATT AAGCCAATTA GAGGCTTAGA CGGTGAATAA
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Protein sequence | MLELLFLLLP IAAGYGWYMG NRNAGQQRQR ETNHLSRQYV TGLNLLLSDQ SDKAVDHFIE LLQVDSDTID THLALGNLFR SKGEVDRAIK IHQNLIARPN LTLEQRNIAL QQLAKDYMVA GILDRAEKIF EQLVDEPEHK EAALLQLVSI HQQTREWEQA IKFANSLVRM GKKKIKPDIA HYYCELATLD LAEENINAAK QHLKKALSTD NLCVRASIMM AKLLMKENNH KAAVSQLESV LDQDIDFVSE ALPLLAECYE TLDREGVLLH FLKEAISKGS GASAELMLSN LIAKHEGTAV AQGYMTKQLL KNPTMKGFYR LMGYHVDEAE NGRAKASLSS LQNLVGEQLK MKPNYRCSKC GFSAHRLFWQ CPSCKGWGVI KPIRGLDGE
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