Gene VSAL_I2219 details

Gene Information

• Locus tag: VSAL_I2219
• Symbol: cmk
• ID: 6988258
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2386625
• End bp: 2387299
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643380502
• Product: cytidylate kinase
• Protein accession: YP_002263585
• Protein GI: 209695656
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0283] Cytidylate kinase
• TIGRFAM ID: [TIGR00017] cytidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000392774
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTATTC ATTCACCAGT CGTCACTGTT GATGGTCCAA GTGGAGCAGG TAAAGGCACT 
CTGTGCATGT TACTTGCCGA AAAGCTAGGT TATAATTTAT TAGATTCTGG TGCGATTTAT 
CGCGTATTAG CACTGGCTGC AATTCACCAT GGTGTTGATT TAGGTTCAGA AGAAGGACTT 
GTTCCTCTTG CTGCTAATCT AGACGTTCAA TTTAAAGCTG AAGGTGACTT GGTTAAAGTC 
ATCTTAGAAG GCGAAGACGT CTCTTCGGAA CTTCGTAAAG AAGAAACTGG TATGGCGGCA 
TCAAAAGTAG CGGCTTTACC TCAAGTACGT GAAGCGTTAT TACGTCGTCA AAGAGCCTTT 
GCTAGTGCCC CTGGACTTGT CGCTGATGGT CGAGATATGG GCACTGTTGT ATTTACAGGT 
GCAGAAGTTA AGATATTTTT AGATGCAAGT GCTGAAGAAC GTGCGAATCG CCGTATGAAG 
CAGTTGCAAC AGAAGGGGTT AAATGTTAGA TTTGACCGTC TTTTAAGCGA AATCCAAGAG 
CGTGATGATC GTGACCGCAA TCGAGCTGTT GCACCATTAC GTCCGGCGGA AGACGCTTTG 
GTACTAGATT CAACGTCAAT GAATATTGAT GAAGTCGTTG CTCAGGCACT TACTTTTATT 
GAATCTAAGC TATAA 

 

Protein sequence

MTIHSPVVTV DGPSGAGKGT LCMLLAEKLG YNLLDSGAIY RVLALAAIHH GVDLGSEEGL 
VPLAANLDVQ FKAEGDLVKV ILEGEDVSSE LRKEETGMAA SKVAALPQVR EALLRRQRAF 
ASAPGLVADG RDMGTVVFTG AEVKIFLDAS AEERANRRMK QLQQKGLNVR FDRLLSEIQE 
RDDRDRNRAV APLRPAEDAL VLDSTSMNID EVVAQALTFI ESKL