Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2218 |
Symbol | aroA |
ID | 6988208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2385186 |
End bp | 2386469 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380501 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_002263584 |
Protein GI | 209695655 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.154296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGCT TAACTCTTCA ACCAATTTCA AAAATTGATG GCCAAATTAA TTTACCTGGT TCAAAAAGTG TTTCTAACCG AGCACTATTA CTTGCTGCAC TAGCGTCAGG AAAAACAACA TTAACTAATT TATTAGACAG CGATGATATT CGACATATGC TTAATGCACT AAAAGCATTG GGTGTTGATT ATAAACTTTC AGAAGATAAG ACGGTTTGCG AAGTGAATGG TCTGGGTCAA GCCTTTAAAT CTACAACAGA AGCTTTAGAA TTATTTCTGG GTAATGCGGG AACCGCAATG CGTCCATTAG CGGCTGCGTT ATGTTTAGGT GAAGGCGAGT TTATCCTTAC TGGTGAACCT CGTATGAAAG AGCGACCAAT TGGGCACCTT GTTACTGCAT TGAAAGCGGC TGGTGCTGAT GTCGAATATT TAGAAAATGA AAATTATCCA CCGTTAAAAA TTAAAGGAAC GGGTTTAAAA GGCGGGAATG TTGATATAGA TGGTTCAATA TCAAGTCAAT TTTTAACGGC TTTTTTAATG GCAGCACCAC TATCATCACA AGAAACAACC ATTAATATTG TTGGCGATTT AGTGTCCAAA CCGTATATCG ATATTACGTT GGACATTATG GCTACTTTTG GTGTTGTAAT TGAAAACAAA GAGTATAAAA CGTTTGTTGT TCCTGCGAAT CAATCTTACA TCGCCCCAGG AGAATTTCTT GTAGAAGGAG ATGCATCATC TGCATCTTAT TTCTTAGCGG CTGCCGCGAT CAAAGGCGGA AGTGTTAAAG TTACGGGTAT TGGTAAAAAA AGCATCCAAG GCGATGTTCA GTTTGCTGAT GCACTAGCAG CAATGGGTGC AGAGATTGAA TGGGGTGATG ACTATGTTAT TGCTCATAAA GGTGAATTAA ACGCCATTGA TATGGATTTT AACCATATTC CAGATGCTGC AATGACAATC GCAACGACAG CGTTGTTCGC AAAAGGCACT ACATCAATTC GCAATGTGTA TAATTGGCGT GTAAAAGAAA CGGATAGATT AGCCGCAATG GCAACTGAAC TCCGTAAAGT AGGTGCTGAA GTTGAAGAAG GTGAGGATTA TATTACGATC ACTCCACCAG CGATGTTACG ACATGCCACT ATTGATACTT ATGACGATCA CCGTATGGCA ATGTGCTTTT CTTTAGTTGC ATTAAGTGAT ACGCCAGTGA CGATTAATGA TCCCGGTTGC ACTTCTAAAA CCTTCCCCGA TTATTTTGAT AAATTGAAAG AACTTAGCGT GTAA
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Protein sequence | MESLTLQPIS KIDGQINLPG SKSVSNRALL LAALASGKTT LTNLLDSDDI RHMLNALKAL GVDYKLSEDK TVCEVNGLGQ AFKSTTEALE LFLGNAGTAM RPLAAALCLG EGEFILTGEP RMKERPIGHL VTALKAAGAD VEYLENENYP PLKIKGTGLK GGNVDIDGSI SSQFLTAFLM AAPLSSQETT INIVGDLVSK PYIDITLDIM ATFGVVIENK EYKTFVVPAN QSYIAPGEFL VEGDASSASY FLAAAAIKGG SVKVTGIGKK SIQGDVQFAD ALAAMGAEIE WGDDYVIAHK GELNAIDMDF NHIPDAAMTI ATTALFAKGT TSIRNVYNWR VKETDRLAAM ATELRKVGAE VEEGEDYITI TPPAMLRHAT IDTYDDHRMA MCFSLVALSD TPVTINDPGC TSKTFPDYFD KLKELSV
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