| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2214 |
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| Symbol | clpA |
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| ID | 6988334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2380907 |
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| End bp | 2383159 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380497 |
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| Product | ATP-dependent Clp protease ATP-binding subunit |
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| Protein accession | YP_002263580 |
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| Protein GI | 209695651 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0988576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATA AAGAATTAGA AGCGAGTTTA AACAGTGCGT TTGCTCGTGC AAGAGAAAAG
CGTCATGAAT TTATGACAGT GGAGCATTTG TTATTTGCTC TATTAGAGAA CCCATCTGCA
CACGAAGCTC TTATTGCTTG CCATACAGAC CTGGATGCTC TTTCGACAGA AATTGATGAA
TTCATAACAC AAACAACTCC TCTTATTCCA GCTGACGATG ATAGTCGTGA AACGCAGCCA
ACGTTAAGCT TTCAACGTGT TCTTCAACGA GCTGTTTTTC ATGTTCAATC ATCAGGTCGT
AATGAAGTCA CTGGCGCGAA TGTTTTAGTC GCTATTTTTA GCGAGCAAGA ATCTCATGCT
GCTTATCTTC TTAAAAAGAA TGATATTAGT CGACTCGATA TTGTTAACTT TATTTCTCAT
GGTGCACCAG AAAATCGAGA TGAGAATTCA GAACAATCAA ATGTAGAAGC CGCTGTTGAA
GGCAATTCTG ATGATCAATT AGAAAGCTTC GCAACTAACT TAAATCAAGT CGCTAAAAAT
GGCGGTATTG ATCCGTTGAT TGGTCGTGAG CAAGAAGTTG AACGAACAAT TCAAGTTCTT
TGTCGTCGAC GTAAAAATAA CCCATTACTA GTGGGTGAAG CTGGAGTCGG AAAAACGGCG
ATAGCGGAAG GGTTAGCATG GAGAATTGTT GAAGAACAAG TTCCCGATGT GATTAAAGAT
TGTATTATTT ATTCTCTTGA TATTGGTTCT CTATTAGCGG GTACTAAATA TCGTGGTGAT
TTTGAAAAAC GATTTAAAGC CATTTTAAAA CAGCTTGAAA AAGAAGAACA TGCGATTTTA
TTCATTGATG AAATCCATAC CATTATTGGC GCTGGTGCCG CTTCTGGTGG GCAAGTTGAT
GCGGCTAATT TAATTAAGCC ATTACTAAGC AGCGGTAAGT TACGTTGTAT TGGTTCTACA
ACTTATCAAG AACACAGTAC TATTTTTGAA AAAGAACGAG CGCTTGCTCG TCGATTCCAA
AAAATTGATA TTTTAGAACC ATCAATAGAT GATACAACTA AAATATTAAT GGGTCTGAAA
AGTAAATATG AAGAACACCA CGAGGTTCGT TATACCAATA AAGCACTCCG TGCTGCGGTA
GAACTGTCAG CGAAATACAT TAATGAGCGT CACTTGCCAG ATAAGGCGAT TGATGTGATT
GATGAAGCTG GTGCCCGTTG TCGTTTGACT CCAATTAGCC GTCGCAAAAA AACCATCAAT
GTTGCTGATA TAGAATCGAT GGTTGCTAAA ATGGCTCGTA TTCCAGAAAA ATCAGTATCA
TCAAGCGATA AAGATGTACT GAAAAAACTG GATGCTAAAC TTAAAATGTT AGTGTTTGGG
CAAGATCAAG GTATCGATGT TTTATGTGAA GCCATTAAAT TGAGCCGTGC TGGACTGGGT
GCAGATAATA AACCTGTTGG TTCTTTCTTG TTTGCGGGTC CGACAGGGGT TGGTAAAACT
GAAGTAACGG TACAATTAGC AAAAGCATTG GGCATAGAAT TATTACGTTT TGATATGTCT
GAGTACGGTG AGCGTCATAC TGTTAGTCGC TTGATCGGTG CTCCTCCTGG TTACGTTGGT
TATGAGCAGG GAGGTCTATT AACCGACGCG GTTATTAAGC ATCCTCATTC TGTCGTATTA
CTTGATGAGC TTGAAAAAGC ACACCCTGAC GTATTTAATT TGCTACTGCA AGTTATGGAT
AATGGGACAT TAACGGATAA CAATGGCCGT AAAGCTGATT TCCGCAATGT TATTTTTGTA
ATGACAACCA ATGCTGGTGT CCATGACACG GTCAAAAAAT CTATTGGTTT AATCCAACAA
GATCACAGTA CCGATGCGAT GGCTGCGATT AAAAAAGTAT TTACGCCAGA ATTTAGAAAC
CGTCTGGATA ATATTATTTG GTTTGAGCAC TTAGGCAAAG ACGTGATCGG GCAAGTTGTT
GATAAGTTCA TTGTTGAATT ACAAGCACAA TTAGACGCTC GTGGTGTATC AATGGAAGTA
TCGCAAGATG TCAAAGAGTG GTTAGCTAAT AAAGGATACG ATAAAGCGAT GGGCGCACGT
CCAATGGCTC GTGTTATTCA AGAAAACTTG AAAAAACCAA TGGCAAATGA GCTATTATTT
GGTGAGTTAG TTAATGGTGG CACCGTTCGA GTTAAATTAA CGAAAGGTGA ATTGGACTTT
GAGTTTACGA GTGAAGCTGA AGTTGTCCAT TAA
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| Protein sequence | MLNKELEASL NSAFARAREK RHEFMTVEHL LFALLENPSA HEALIACHTD LDALSTEIDE
FITQTTPLIP ADDDSRETQP TLSFQRVLQR AVFHVQSSGR NEVTGANVLV AIFSEQESHA
AYLLKKNDIS RLDIVNFISH GAPENRDENS EQSNVEAAVE GNSDDQLESF ATNLNQVAKN
GGIDPLIGRE QEVERTIQVL CRRRKNNPLL VGEAGVGKTA IAEGLAWRIV EEQVPDVIKD
CIIYSLDIGS LLAGTKYRGD FEKRFKAILK QLEKEEHAIL FIDEIHTIIG AGAASGGQVD
AANLIKPLLS SGKLRCIGST TYQEHSTIFE KERALARRFQ KIDILEPSID DTTKILMGLK
SKYEEHHEVR YTNKALRAAV ELSAKYINER HLPDKAIDVI DEAGARCRLT PISRRKKTIN
VADIESMVAK MARIPEKSVS SSDKDVLKKL DAKLKMLVFG QDQGIDVLCE AIKLSRAGLG
ADNKPVGSFL FAGPTGVGKT EVTVQLAKAL GIELLRFDMS EYGERHTVSR LIGAPPGYVG
YEQGGLLTDA VIKHPHSVVL LDELEKAHPD VFNLLLQVMD NGTLTDNNGR KADFRNVIFV
MTTNAGVHDT VKKSIGLIQQ DHSTDAMAAI KKVFTPEFRN RLDNIIWFEH LGKDVIGQVV
DKFIVELQAQ LDARGVSMEV SQDVKEWLAN KGYDKAMGAR PMARVIQENL KKPMANELLF
GELVNGGTVR VKLTKGELDF EFTSEAEVVH
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