| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2212 |
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| Symbol | cspD |
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| ID | 6987660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2379927 |
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| End bp | 2380148 |
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| Gene Length | 222 bp |
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| Protein Length | 73 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380495 |
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| Product | cold shock-like protein CspD |
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| Protein accession | YP_002263578 |
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| Protein GI | 209695649 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0732526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAATAG GCACAGTAAA ATGGTTCAAT AACGCCAAAG GGTTTGGCTT CATTTGTCCA
GAAGGTGAGG ATGGTGATAT TTTTGCTCAT TACTCAACAA TCGAGATGGA TGGCTACCGT
ACATTAAAAG CAGGACAAGC TGTCACCTAC GAAATTCATG AAGGCCCTAA AGGCTATCAT
GCAAGCGAAA TTAAACCGCT TGAAGGTGAA GCTGTAAAAT AG
|
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| Protein sequence | MAIGTVKWFN NAKGFGFICP EGEDGDIFAH YSTIEMDGYR TLKAGQAVTY EIHEGPKGYH
ASEIKPLEGE AVK
|
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