Gene VSAL_I2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2207 
Symbol 
ID6987657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2372995 
End bp2374263 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content40% 
IMG OID643380489 
Producthypothetical protein 
Protein accessionYP_002263573 
Protein GI209695644 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0557869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAT TTATTGATCG AAGATTGAAC GGAAAAAAGA AAAGCACCGT CAACAGACAG 
CGCTTTATTC GTCGCCACAA AGACCAAATT AAACGTGCGG TCTCTGATGC AGTAAACCAA
CGTTCAGTAA CGAATACTGA AACGGGAGAA AGCATCTCTA TTCCTAAAGG GGACATCTCT
GAACCTATTT TTCATCAAGG TCAGGGAGGC ATTCGCGAAC GCGTTCATCC AGGAAATGAC
CAATTTATCA AAGGAGATAA AATCGAACGT CCTCAAGGAG GCGCGGGAGG GGGGTCAGGA
GACGGCGATG CCAGTGCCGA CGGTGAAGGA GAAGATGAAT TTAGTTTCCA AATTTCAAAA
GATGAATACT TAGACATTCT TTTTGAACAA CTTGAATTGC CTAATTTAGA AAAAAACCAA
GTTCAAAAAA TAACAGAATG GGAAACACAT CGCGCTGGGT ATCAAACAGC CGGTGTTCCA
TCAAACATAG ACATTGTTCG TTCGTTGCAG CAATCACTTG CTCGCCGTAC TGCCATGACA
GCAGGAAAAA GACGCTTACT TAAAGAATTA GAACAAGAAC TTGAGAACAT AAAAAACAGC
GAACCGGCAC AACCGCTCTC GGTTCGACAA ATGAAAGAAG AAATCGAAGC ATTAAGAACC
AAAATTAAAC ATGTGCCTTA CATTGATTCT TTCGATTTAC GCTATAAAAA CTATGAACGA
ACCCCTATTC CATCAAGCCA AGCGGTTATG TTTTGTTTAA TGGACGTATC CGGCTCCATG
GACCAAGCGA CTAAAGACAT TGCTAAACGC TTCTATGTCT TACTTTATTT ATTCTTAACT
CGTACTTATG AAAATGTCGA CGTTGTTTTT ATTCGCCACC ATACTCAAGC AAAAGAAGTT
GATGAGCATG AATTTTTCTA CTCCCAAGAA ACGGGAGGCA CTATGGTTTC AAGCGCATTA
AAACTCATGA ATGACATTGT CACTAAACGT TATCCCGCCA ATGAGTGGAA TATTTATGCT
GCTCAAGCCT CTGATGGGGA CAACTGGGCA GACGATTCAC CAAAATGTAA GGAGCTACTT
ACTACGTCAA TTCTTCCTTA TTGCCAATAT TATTCCTACA TTGAAATCAC AAAACGAACA
CACCAAACAC TGTGGAACGA ATATGAAAAA CTATCTCAAG GGTGCAATAA CTTTGCGATG
AAAAATATCA AAACCGTTGA TGATATTTAC CCTATTTTTA GAGAATTATT CCACAAACAA
TTGGCTTAG
 
Protein sequence
MAQFIDRRLN GKKKSTVNRQ RFIRRHKDQI KRAVSDAVNQ RSVTNTETGE SISIPKGDIS 
EPIFHQGQGG IRERVHPGND QFIKGDKIER PQGGAGGGSG DGDASADGEG EDEFSFQISK
DEYLDILFEQ LELPNLEKNQ VQKITEWETH RAGYQTAGVP SNIDIVRSLQ QSLARRTAMT
AGKRRLLKEL EQELENIKNS EPAQPLSVRQ MKEEIEALRT KIKHVPYIDS FDLRYKNYER
TPIPSSQAVM FCLMDVSGSM DQATKDIAKR FYVLLYLFLT RTYENVDVVF IRHHTQAKEV
DEHEFFYSQE TGGTMVSSAL KLMNDIVTKR YPANEWNIYA AQASDGDNWA DDSPKCKELL
TTSILPYCQY YSYIEITKRT HQTLWNEYEK LSQGCNNFAM KNIKTVDDIY PIFRELFHKQ
LA