| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2192 |
|---|
| Symbol | |
|---|
| ID | 6987650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2354605 |
|---|
| End bp | 2355591 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643380474 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002263558 |
|---|
| Protein GI | 209695629 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATTCA TGCTTACTTC ATTTAAAAAA CAGATCTCAG CTTCCATTAT TGCCGCCACG
TTTGCTCTTT CAGGATCTGC ATTTGCAGCA GACCTTGAAA AAATACACTT TATTATTCCT
GGTGGTGCCG GAGGCGGTTG GGATATGACC GCTCGTGGTA CGGGTGATGT ACTATTAAAA
TCAAACCTGA TTGAGCAGGC CTCTTATCAA AACCTTTCTG GCGGTGGCGG TGGTAAAGCC
ATTGCTCACC TTATCGAGAC GGCCAATCGT CAAACAGACA CCTTAATGGT GAACTCAACG
CCTATCGTGA TCCGATCGTT AAGTGGTATT TTCCCACAAT CATTCCGAGA TCTCACGCCG
ATTGCCGCCA CTATCGCCGA TTACGGTGCT ATCGTGGTAA ATAAAGAGTC AAAATACACC
AGTTGGGATC AAGTCGTTGC TGATTTTAAG ACAGACCCTC GCTCAGTAAA AATTGCAGGC
GGTTCAGCTC GCGGCAGTAT GGATCATCTT GTCATAGCGG CCGCATTTAA AGGGGAAGGG
TTTGATCCAA GAAAGGTACG CTACATCGCT TATGATGCCG GCGGAAAAGC CATGGCCGCT
CTACTTTCTG GCGAAACGCC TCTTCTATCA ACGGGTTTAG GTGAAGTTCT AGAAATGTCG
AAAAGCGGTC AAGTCCGTAT TCTTGCGATT ACCGCCCCTA AACGTTTAGA AAGCGCACCA
AACATTCCAA CACTGACCGA ATACGGTAAT GATACGGTTT TTGCTAACTG GCGTGGCTTC
TTTGCCGCAC CCGGCACACC TCAAGCAAAA ATTGATGAAT ATACCGAAGT CTTTAGCAAG
ATGTATGAAA CAGAACAATG GGCCGTTGTT AGAGATCGTA ATGGTTGGAT TGATAACTTC
AAAGCAGATA AAGAATTCTA TGCCTTTCTT GAGAACCAAG AAAAGATCAT GGGTGACCTA
ATGCCTGAAC TTGGCTTTTT AAAATAA
|
|---|
| Protein sequence | MLFMLTSFKK QISASIIAAT FALSGSAFAA DLEKIHFIIP GGAGGGWDMT ARGTGDVLLK
SNLIEQASYQ NLSGGGGGKA IAHLIETANR QTDTLMVNST PIVIRSLSGI FPQSFRDLTP
IAATIADYGA IVVNKESKYT SWDQVVADFK TDPRSVKIAG GSARGSMDHL VIAAAFKGEG
FDPRKVRYIA YDAGGKAMAA LLSGETPLLS TGLGEVLEMS KSGQVRILAI TAPKRLESAP
NIPTLTEYGN DTVFANWRGF FAAPGTPQAK IDEYTEVFSK MYETEQWAVV RDRNGWIDNF
KADKEFYAFL ENQEKIMGDL MPELGFLK
|
|---|
| |