| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2189 |
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| Symbol | rhlE |
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| ID | 6987648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2350959 |
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| End bp | 2352155 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380471 |
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| Product | putative ATP-dependent RNA helicase |
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| Protein accession | YP_002263555 |
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| Protein GI | 209695626 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTTT CTAACCTTGG ATTAAGTAAT CCAATTTTAA AAGCCATTAA TGAACTAGGC
TACAAAGCCC CAACGCCAAT TCAAGAAAAG GCGATTCCTG TTGCTCTAAC AGGAAAAAAC
CTGATCGCAG CGGCACAAAC TGGTACAGGT AAAACCGCAA GTTTTGTATT ACCAATCTTG
CAAATGTTAA GTGAAGAACA AACGAAAGTT CGAGCAAAAC GTATTCGTGC ATTGATCTTA
ACGCCAACAC GCGAACTTGC CGTTCAAGTT GAAGATAACA TCAGTAAGTA CAGCAAACAT
TTAGATCTTA CGTCACTCGC TATGTATGGT GGTGTTGATT ATAAAGAGCA GAAACAACGC
TTAATTGAAG GGGTTGATAT TCTGGTTGCA ACGCCTGGTC GTTTGCTTGA TATGTACACT
CAACGTGCGG TACATTTTGA CGAAATTGAT ATTCTCGTAC TCGACGAAGC CGATAGAATG
CTAGACATGG GCTTTATCGA AGACATCAAT AAAATTATTG AACGTTTACC GTTAGAACGC
CAAAACTTAT TGTTCTCAGC AACCCTGTCA GAACAAGTTC GTGCATTGGC AAGAACAGCA
ATCAATAATC CAATTGAAAT TACCATTGAG CGTAACAGTA ACGCTGAGCC TAAAATTGAC
CAATGGTTAA TTACGGTTGA TAAAGACAAA AAATCGGCGC TAATCAGTCA CCTAATTAAA
GAAAACGATT GGGATCAAGC GTTGATCTTC ATCGAAACAA AACACGGTGC AGCGAAACTG
GTAGGTCAAC TTGAAAAACG CGGCATTACC GCTGAAGCGT TCCACAGTGG TCGTAGCCAA
GATGCTCGCT CAAAAGTATT GAATGACTTT AAAGAAGGTC GTTTGAAGTA TTTAGTCGCG
ACAGGGATTG CGGCTCGTGG TATTGATATC GATGAATTGA CTCGAGTCAT TAACTACGAC
TTACCGTTCC CTGCTGAAGA TTATGTTCAC CGTATTGGCC GTACAGGCCG TGCTGGTTCA
TCTGGTGAAG CGATTTCATT TGTATCTCGA GATGATTTTA AGAACTTGTG TATGATTGAA
AAACGTCTGG GTCACTTAAT TGTCCGTAAA GAAATTGAAG GATTCGTCCC TAATAAAGAC
GTACCAATTT CAATTTTGAA CTTTAAACCG ACAAGAAAAC CAGCACCAAA ATTTTAA
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| Protein sequence | MPFSNLGLSN PILKAINELG YKAPTPIQEK AIPVALTGKN LIAAAQTGTG KTASFVLPIL
QMLSEEQTKV RAKRIRALIL TPTRELAVQV EDNISKYSKH LDLTSLAMYG GVDYKEQKQR
LIEGVDILVA TPGRLLDMYT QRAVHFDEID ILVLDEADRM LDMGFIEDIN KIIERLPLER
QNLLFSATLS EQVRALARTA INNPIEITIE RNSNAEPKID QWLITVDKDK KSALISHLIK
ENDWDQALIF IETKHGAAKL VGQLEKRGIT AEAFHSGRSQ DARSKVLNDF KEGRLKYLVA
TGIAARGIDI DELTRVINYD LPFPAEDYVH RIGRTGRAGS SGEAISFVSR DDFKNLCMIE
KRLGHLIVRK EIEGFVPNKD VPISILNFKP TRKPAPKF
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