| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2186 |
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| Symbol | |
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| ID | 6987645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2348783 |
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| End bp | 2349457 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380468 |
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| Product | HTH-type transcriptional regulator, two-component response regulator |
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| Protein accession | YP_002263552 |
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| Protein GI | 209695623 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4565] Response regulator of citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAGTA AAGTAACCAT CGTTATTGTC GAAGATGACA TTGCTATTGC GGAAATACAT
CGTCGTAATT TAGATAAAAT AGACGCGGTT GAGGTGATCG GTATTGCCGC AAGTAAAGAA
GAAGCCGATA CCTTGTTTGA TGTGTTGAAC CCAGATATGG TGTTACTCGA TATTTATTTA
CCTGATGGTA ATGGGTTGGA TATTTTGCGT GAGCTACGCC AAAAAGAAAA CTCCCCAGAC
GTCATTTTAA TTACCGCAGA CAGAGACGTA AATACATTAC AAGAAGCCAT GCGTGGTGGT
GTGATTGATT ATTTGCTAAA ACCGGTCATC TTTAGCCGAT TAGAAGAGTC CATAAATAAG
TATTTGAGCC AAAAGAAACA ACTGACTGCT CGGCTTGATA TTGATCAATC AATGGTGGAT
GCGATGCTAC ATTCTGGGGT CGCATCGCAA GTTACTCGTT TACCAAAAGG AATTGATGGA
GTAACTTTAG AAAAGGTACG ACGTCTTTTT GAGAGTAAAA CTAAATTAAC CGCAGATCAG
GCGGGGGAAC TCTTTGGCGC AAGCAGAACA ACAGCGCGTC GTTATCTCGA ATATTTGATT
AGCTCTGGAG AGTTGAGTGC TGATCTGTCT TATGGCAGTG TGGGGCGACC AGAGAGAACT
TACTTTAAGC ATTAA
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| Protein sequence | MSSKVTIVIV EDDIAIAEIH RRNLDKIDAV EVIGIAASKE EADTLFDVLN PDMVLLDIYL
PDGNGLDILR ELRQKENSPD VILITADRDV NTLQEAMRGG VIDYLLKPVI FSRLEESINK
YLSQKKQLTA RLDIDQSMVD AMLHSGVASQ VTRLPKGIDG VTLEKVRRLF ESKTKLTADQ
AGELFGASRT TARRYLEYLI SSGELSADLS YGSVGRPERT YFKH
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