| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2181 |
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| Symbol | rrmA |
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| ID | 6987642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2342095 |
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| End bp | 2342904 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380464 |
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| Product | 23S rRNA methyltransferase A |
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| Protein accession | YP_002263548 |
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| Protein GI | 209695619 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTATC AATGCCCTTT ATGCCAGCAC GAATTACACG TTACGCATAA TCAATATCGC
TGTGAAAATA ATCATCAATT TGATAATGCA AAAGAAGGGT ATGTGAATCT CATGCCTGCA
CATCATAAAC GCTCGAAGAA CCCGGGTGAT AATAAAGAGA TGATGCAAGC AAGACGTGCT
TTTTTAGAAG CAGGACATTA CCAACCTATG CAACAGCTGG TTGCTGATTT TTGTCAAACC
TACCTTACTG ATGAATCATC TACCTTATTA GATATCGGTT GTGGTGAAGG TTATTACACT
GCCGAAATTC AGAACCGCCT TGTAGAAAGA CGCGCTCAAG TATTTGGACT AGACATATCA
AAAGTAGCGA TTAAATTTGC CGCAAAACGT TATCCAAACT GTCAATTTAG CGTGGCATCG
AGCCATCGTT TGCCTTTCTC TGATCAAAGT TTAAATGGCA TTGTTCGCAT TTATGCGCCA
TGCAAAGCCG AAGAGTTACA ACGTACGATT AAAGACGAGG GTTATTTGTT TACTGTAACC
CCTGCAAGTC ATCACTTATT TGAGCTACGT GAAGAAGTTT ATGGTGAAGT ACGCTTACAC
GATGAAGCCG CTGAGGAAAT TGAAGGCTTT GAATTGGTAA AAGAAGAAAA GCTTACTTAC
GATATGTCAT TAACGGGCAT TGAAGCATTA CATTTACTGG ATATGACGCC TTTTTCATGG
AAAGCCACAC CTGAATTTAA ACATGATTTA GCAAATAAAA CATCGTTCAT CTGTAAAGCT
GATTTCATGA TAAGAGCTTA TAAAAAATAA
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| Protein sequence | MSYQCPLCQH ELHVTHNQYR CENNHQFDNA KEGYVNLMPA HHKRSKNPGD NKEMMQARRA
FLEAGHYQPM QQLVADFCQT YLTDESSTLL DIGCGEGYYT AEIQNRLVER RAQVFGLDIS
KVAIKFAAKR YPNCQFSVAS SHRLPFSDQS LNGIVRIYAP CKAEELQRTI KDEGYLFTVT
PASHHLFELR EEVYGEVRLH DEAAEEIEGF ELVKEEKLTY DMSLTGIEAL HLLDMTPFSW
KATPEFKHDL ANKTSFICKA DFMIRAYKK
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