Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2166 |
Symbol | |
ID | 6987630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2328885 |
End bp | 2329418 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643380450 |
Product | hypothetical protein |
Protein accession | YP_002263534 |
Protein GI | 209695605 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAA ACGACCACCT ATCAGATGAC GAACTTTCTC TGTTCCGTGA AGCAGTACAA GGCTCTAAAA AGTTGCGACA GGATACCATA ATCCATCAAC CGAGTAAGAA CTTTAGCGAA CAACAAAAGC AAAGAAAATC ATTAAAAGAA GGGAAAAATG AAGAGTTTTT CTTTTCTGAC GAATTTGTCC CACTTCTTAA TGAAGACGGC CCAGTTCGCT ACGCGCGTGA TGGCGTATCA AAGTATGAAG TAAAGCGTCT ACGACGTGGG GTTTATGTCC CTGATGTATT TTTAGATATG CATGGCATGA AGCAAGATGA AGCCAAACGA GAGTTAGGCT CAATGATTGC GTATTGCTTA AAAGAAAATA TATCTTGTGC CAGTGTCATG CACGGTATCG GCAAGCACAT ATTGAAACAA AAAGTCCCTT TATGGCTAGC CCAACACCCA GACGTAATGG CATTCCATCA AGCACCTTTA GAATTTGGTG GCGCAGGCGC CATTTTAGTT TTACTTTCGA TCCCAGACCG ATAA
|
Protein sequence | MSKNDHLSDD ELSLFREAVQ GSKKLRQDTI IHQPSKNFSE QQKQRKSLKE GKNEEFFFSD EFVPLLNEDG PVRYARDGVS KYEVKRLRRG VYVPDVFLDM HGMKQDEAKR ELGSMIAYCL KENISCASVM HGIGKHILKQ KVPLWLAQHP DVMAFHQAPL EFGGAGAILV LLSIPDR
|
| |